Molecular Subtyping of Diffuse Large B-Cell Lymphoma Using a Novel Quantitative RT-PCR Assay.


Journal

The Journal of molecular diagnostics : JMD
ISSN: 1943-7811
Titre abrégé: J Mol Diagn
Pays: United States
ID NLM: 100893612

Informations de publication

Date de publication:
03 2021
Historique:
received: 30 04 2020
revised: 20 10 2020
accepted: 25 11 2020
pubmed: 2 1 2021
medline: 31 3 2022
entrez: 1 1 2021
Statut: ppublish

Résumé

Diffuse large B-cell lymphoma (DLBCL) is a heterogeneous disease. Cell-of-origin classification in DLBCL has identified activated B cell (ABC) and germinal center B cell (GCB) as two major subtypes. Patients with the ABC subtype show reduced overall survival with standard therapies. Development of a quantitative RT-PCR-based lymphoma cell-of-origin (LCOO) assay to determine ABC, GCB, and unclassifiable subtypes in formalin-fixed, paraffin-embedded tissue (FFPET) DLBCL samples is reported. The LCOO classifier was trained on two DLBCL cohorts with validation performed by using an analytical grade assay in an independent cohort of 60 FFPET DLBCL samples. In the validation cohort, LCOO classification was 88.1%, 84.7%, and 84.7% concordant with microarray, immunohistochemistry (Hans classification), and Lymphoma Subtyping Test, respectively. Importantly, LCOO and Lymphoma Subtyping Test assays commonly assigned subtypes in 17 (94.4%) of 18 ABC samples and 34 (89.5%) of 38 GCB DLBCL samples from this cohort. Progression-free survival and overall survival of ABC and GCB subtypes, as classified by all platforms, were not significantly different in the validation cohort. LCOO classification using publicly available microarray gene expression from two independent data sets (414 fresh frozen and 474 FFPET DLBCL biopsies) revealed a significantly worse outcome for the ABC subtype compared with that of the GCB subtype. Thus, a sensitive, reproducible, LCOO assay developed on an easy to standardize quantitative RT-PCR platform may be an important clinical tool for DLBCL cell-of-origin classification.

Identifiants

pubmed: 33385586
pii: S1525-1578(20)30611-5
doi: 10.1016/j.jmoldx.2020.11.013
pii:
doi:

Substances chimiques

Biomarkers, Tumor 0
R-CHOP protocol 0
Rituximab 4F4X42SYQ6
Vincristine 5J49Q6B70F
Doxorubicin 80168379AG
Cyclophosphamide 8N3DW7272P
Prednisone VB0R961HZT

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

323-340

Informations de copyright

Copyright © 2021 Association for Molecular Pathology and American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved.

Auteurs

Robert Ta (R)

Department of Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts; Department of Cancer Molecular Diagnostics, St. James's Hospital, Dublin, Ireland; Department of Histopathology, St. James's Hospital, Dublin, Ireland.

Chris Santini (C)

Department of PCR IVD Research and Early Development, Roche Molecular Systems, Inc., Pleasanton, California.

Patricia Gou (P)

Department of Histopathology, St. James's Hospital, Dublin, Ireland.

Greg Lee (G)

Department of Haematology, St. James's Hospital, Dublin, Ireland.

Yu Chuan Tai (YC)

Department of Bioinformatics, Roche Molecular Systems, Inc., Pleasanton, California.

Cathal O'Brien (C)

Department of Cancer Molecular Diagnostics, St. James's Hospital, Dublin, Ireland; Trinity College, Dublin, Ireland.

Marcel Fontecha (M)

Department of PCR IVD Research and Early Development, Roche Molecular Systems, Inc., Pleasanton, California.

Cliona Grant (C)

Department of Oncology, St. James's Hospital, Dublin, Ireland.

Larry Bacon (L)

Department of Haematology, St. James's Hospital, Dublin, Ireland; Trinity College, Dublin, Ireland.

Stephen Finn (S)

Department of Cancer Molecular Diagnostics, St. James's Hospital, Dublin, Ireland; Department of Histopathology, St. James's Hospital, Dublin, Ireland; Trinity College, Dublin, Ireland.

Elisabeth Vandenberghe (E)

Department of Cancer Molecular Diagnostics, St. James's Hospital, Dublin, Ireland; Department of Haematology, St. James's Hospital, Dublin, Ireland; Trinity College, Dublin, Ireland.

Fiona Quinn (F)

Department of Cancer Molecular Diagnostics, St. James's Hospital, Dublin, Ireland; Trinity College, Dublin, Ireland.

Rajiv Dua (R)

Department of PCR IVD Research and Early Development, Roche Molecular Systems, Inc., Pleasanton, California. Electronic address: rajiv.dua@roche.com.

Richard Flavin (R)

Department of Cancer Molecular Diagnostics, St. James's Hospital, Dublin, Ireland; Department of Histopathology, St. James's Hospital, Dublin, Ireland; Trinity College, Dublin, Ireland.

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Classifications MeSH