Development and Validation of an Automated Radiomic CT Signature for Detecting COVID-19.

COVID-19 artificial intelligence computed tomography machine learning radiomics

Journal

Diagnostics (Basel, Switzerland)
ISSN: 2075-4418
Titre abrégé: Diagnostics (Basel)
Pays: Switzerland
ID NLM: 101658402

Informations de publication

Date de publication:
30 Dec 2020
Historique:
received: 12 10 2020
revised: 22 12 2020
accepted: 23 12 2020
entrez: 5 1 2021
pubmed: 6 1 2021
medline: 6 1 2021
Statut: epublish

Résumé

The coronavirus disease 2019 (COVID-19) outbreak has reached pandemic status. Drastic measures of social distancing are enforced in society and healthcare systems are being pushed to and beyond their limits. To help in the fight against this threat on human health, a fully automated AI framework was developed to extract radiomics features from volumetric chest computed tomography (CT) exams. The detection model was developed on a dataset of 1381 patients (181 COVID-19 patients plus 1200 non COVID control patients). A second, independent dataset of 197 RT-PCR confirmed COVID-19 patients and 500 control patients was used to assess the performance of the model. Diagnostic performance was assessed by the area under the receiver operating characteristic curve (AUC). The model had an AUC of 0.882 (95% CI: 0.851-0.913) in the independent test dataset (641 patients). The optimal decision threshold, considering the cost of false negatives twice as high as the cost of false positives, resulted in an accuracy of 85.18%, a sensitivity of 69.52%, a specificity of 91.63%, a negative predictive value (NPV) of 94.46% and a positive predictive value (PPV) of 59.44%. Benchmarked against RT-PCR confirmed cases of COVID-19, our AI framework can accurately differentiate COVID-19 from routine clinical conditions in a fully automated fashion. Thus, providing rapid accurate diagnosis in patients suspected of COVID-19 infection, facilitating the timely implementation of isolation procedures and early intervention.

Identifiants

pubmed: 33396587
pii: diagnostics11010041
doi: 10.3390/diagnostics11010041
pmc: PMC7823620
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Stichting Euregio Maas-Rijn
ID : EMR4
Organisme : European Research Council
ID : ERC-ADG-2015, n° 694812 -  Hypoximmuno
Pays : International
Organisme : FP7 People: Marie-Curie Actions
ID : PREDICT - ITN - n° 766276

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Auteurs

Julien Guiot (J)

Department of Pneumology, University Hospital of Liège, 4020 Liège, Belgium.

Akshayaa Vaidyanathan (A)

Research and Development, Oncoradiomics SA, 4000 Liège, Belgium.
The D-Lab, Department of Precision Medicine, Maastricht University, 6229 Maastricht, The Netherlands.

Louis Deprez (L)

Department of Radiology, University Hospital of Liège, 4020 Liège, Belgium.

Fadila Zerka (F)

Research and Development, Oncoradiomics SA, 4000 Liège, Belgium.
The D-Lab, Department of Precision Medicine, Maastricht University, 6229 Maastricht, The Netherlands.

Denis Danthine (D)

Department of Radiology, University Hospital of Liège, 4020 Liège, Belgium.

Anne-Noëlle Frix (AN)

Department of Pneumology, University Hospital of Liège, 4020 Liège, Belgium.

Marie Thys (M)

Department of Medico-Economic Information, University Hospital of Liège, 4020 Liège, Belgium.

Monique Henket (M)

Department of Pneumology, University Hospital of Liège, 4020 Liège, Belgium.

Gregory Canivet (G)

Department of Computer Applications, University Hospital of Liège, 4020 Liège, Belgium.

Stephane Mathieu (S)

Department of Computer Applications, University Hospital of Liège, 4020 Liège, Belgium.

Evanthia Eftaxia (E)

Department of Radiology, University Hospital of Liège, 4020 Liège, Belgium.

Philippe Lambin (P)

The D-Lab, Department of Precision Medicine, Maastricht University, 6229 Maastricht, The Netherlands.

Nathan Tsoutzidis (N)

Research and Development, Oncoradiomics SA, 4000 Liège, Belgium.

Benjamin Miraglio (B)

Research and Development, Oncoradiomics SA, 4000 Liège, Belgium.

Sean Walsh (S)

Research and Development, Oncoradiomics SA, 4000 Liège, Belgium.

Michel Moutschen (M)

Department of Infectious Diseases, University Hospital of Liège, 4020 Liège, Belgium.

Renaud Louis (R)

Department of Pneumology, University Hospital of Liège, 4020 Liège, Belgium.

Paul Meunier (P)

Department of Radiology, University Hospital of Liège, 4020 Liège, Belgium.

Wim Vos (W)

Research and Development, Oncoradiomics SA, 4000 Liège, Belgium.

Ralph T H Leijenaar (RTH)

Research and Development, Oncoradiomics SA, 4000 Liège, Belgium.

Pierre Lovinfosse (P)

Department of Nuclear Medicine and Oncological Imaging, University Hospital of Liège, 4020 Liège, Belgium.

Classifications MeSH