Deep learning-assisted differentiation of pathologically proven atypical and typical hepatocellular carcinoma (HCC) versus non-HCC on contrast-enhanced MRI of the liver.


Journal

European radiology
ISSN: 1432-1084
Titre abrégé: Eur Radiol
Pays: Germany
ID NLM: 9114774

Informations de publication

Date de publication:
Jul 2021
Historique:
received: 30 09 2020
accepted: 23 11 2020
revised: 06 11 2020
pubmed: 8 1 2021
medline: 24 6 2021
entrez: 7 1 2021
Statut: ppublish

Résumé

To train a deep learning model to differentiate between pathologically proven hepatocellular carcinoma (HCC) and non-HCC lesions including lesions with atypical imaging features on MRI. This IRB-approved retrospective study included 118 patients with 150 lesions (93 (62%) HCC and 57 (38%) non-HCC) pathologically confirmed through biopsies (n = 72), resections (n = 29), liver transplants (n = 46), and autopsies (n = 3). Forty-seven percent of HCC lesions showed atypical imaging features (not meeting Liver Imaging Reporting and Data System [LI-RADS] criteria for definitive HCC/LR5). A 3D convolutional neural network (CNN) was trained on 140 lesions and tested for its ability to classify the 10 remaining lesions (5 HCC/5 non-HCC). Performance of the model was averaged over 150 runs with random sub-sampling to provide class-balanced test sets. A lesion grading system was developed to demonstrate the similarity between atypical HCC and non-HCC lesions prone to misclassification by the CNN. The CNN demonstrated an overall accuracy of 87.3%. Sensitivities/specificities for HCC and non-HCC lesions were 92.7%/82.0% and 82.0%/92.7%, respectively. The area under the receiver operating curve was 0.912. CNN's performance was correlated with the lesion grading system, becoming less accurate the more atypical imaging features the lesions showed. This study provides proof-of-concept for CNN-based classification of both typical- and atypical-appearing HCC lesions on multi-phasic MRI, utilizing pathologically confirmed lesions as "ground truth." • A CNN trained on atypical appearing pathologically proven HCC lesions not meeting LI-RADS criteria for definitive HCC (LR5) can correctly differentiate HCC lesions from other liver malignancies, potentially expanding the role of image-based diagnosis in primary liver cancer with atypical features. • The trained CNN demonstrated an overall accuracy of 87.3% and a computational time of < 3 ms which paves the way for clinical application as a decision support instrument.

Identifiants

pubmed: 33409782
doi: 10.1007/s00330-020-07559-1
pii: 10.1007/s00330-020-07559-1
pmc: PMC8222094
mid: NIHMS1660820
doi:

Substances chimiques

Contrast Media 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

4981-4990

Subventions

Organisme : NCI NIH HHS
ID : R01 CA206180
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR001863
Pays : United States
Organisme : RSNA Research Resident Grant
ID : #RR1731
Organisme : NIH HHS
ID : NIH/NCI R01 CA206180
Pays : United States

Références

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Auteurs

Paula M Oestmann (PM)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.
Institute of Radiology, Berlin Institute of Health, Charité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität, 10117, Berlin, Germany.
Faculty of Medicine, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany.

Clinton J Wang (CJ)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.
Department of Biomedical Engineering, Yale School of Engineering and Applied Science, New Haven, CT, 06520, USA.

Lynn J Savic (LJ)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.
Institute of Radiology, Berlin Institute of Health, Charité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität, 10117, Berlin, Germany.

Charlie A Hamm (CA)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.
Institute of Radiology, Berlin Institute of Health, Charité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität, 10117, Berlin, Germany.

Sophie Stark (S)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.
Institute of Radiology, Berlin Institute of Health, Charité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität, 10117, Berlin, Germany.
Faculty of Medicine, Albert-Ludwigs-University Freiburg, Freiburg, Germany.

Isabel Schobert (I)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.
Institute of Radiology, Berlin Institute of Health, Charité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität, 10117, Berlin, Germany.

Bernhard Gebauer (B)

Institute of Radiology, Berlin Institute of Health, Charité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität, 10117, Berlin, Germany.

Todd Schlachter (T)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.

MingDe Lin (M)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.

Jeffrey C Weinreb (JC)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.

Ramesh Batra (R)

Department of Transplantation and Immunology, 333 Cedar Street, New Haven, CT, 06520, USA.

David Mulligan (D)

Department of Transplantation and Immunology, 333 Cedar Street, New Haven, CT, 06520, USA.

Xuchen Zhang (X)

Department of Pathology, Yale School of Medicine, 310 Cedar Street, New Haven, CT, 06520, USA.

James S Duncan (JS)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA.
Department of Biomedical Engineering, Yale School of Engineering and Applied Science, New Haven, CT, 06520, USA.

Julius Chapiro (J)

Department of Radiology and Biomedical Imaging, Yale School of Medicine, 333 Cedar Street, New Haven, CT, 06520, USA. julius.chapiro@yale.edu.

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