Network for Biomarker Immunoprofiling for Cancer Immunotherapy: Cancer Immune Monitoring and Analysis Centers and Cancer Immunologic Data Commons (CIMAC-CIDC).
Journal
Clinical cancer research : an official journal of the American Association for Cancer Research
ISSN: 1557-3265
Titre abrégé: Clin Cancer Res
Pays: United States
ID NLM: 9502500
Informations de publication
Date de publication:
15 09 2021
15 09 2021
Historique:
received:
17
08
2020
revised:
09
11
2020
accepted:
23
12
2020
pubmed:
10
1
2021
medline:
2
4
2022
entrez:
9
1
2021
Statut:
ppublish
Résumé
Immunoprofiling to identify biomarkers and integration with clinical trial outcomes are critical to improving immunotherapy approaches for patients with cancer. However, the translational potential of individual studies is often limited by small sample size of trials and the complexity of immuno-oncology biomarkers. Variability in assay performance further limits comparison and interpretation of data across studies and laboratories. To enable a systematic approach to biomarker identification and correlation with clinical outcome across trials, the Cancer Immune Monitoring and Analysis Centers and Cancer Immunologic Data Commons (CIMAC-CIDC) Network was established through support of the Cancer Moonshot The CIMAC-CIDC Network is composed of four academic centers with multidisciplinary expertise in cancer immunotherapy that perform validated and harmonized assays for immunoprofiling and conduct correlative analyses. A data coordinating center (CIDC) provides the computational expertise and informatics platforms for the storage, integration, and analysis of biomarker and clinical data. This overview highlights strategies for assay harmonization to enable cross-trial and cross-site data analysis and describes key elements for establishing a network to enhance immuno-oncology biomarker development. These include an operational infrastructure, validation and harmonization of core immunoprofiling assays, platforms for data ingestion and integration, and access to specimens from clinical trials. Published in the same volume are reports of harmonization for core analyses: whole-exome sequencing, RNA sequencing, cytometry by time of flight, and IHC/immunofluorescence.
Identifiants
pubmed: 33419780
pii: 1078-0432.CCR-20-3241
doi: 10.1158/1078-0432.CCR-20-3241
pmc: PMC8491462
mid: NIHMS1659034
doi:
Substances chimiques
Biomarkers, Tumor
0
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
5038-5048Subventions
Organisme : NCI NIH HHS
ID : P30 CA016672
Pays : United States
Organisme : NCI NIH HHS
ID : U24 CA224319
Pays : United States
Organisme : NCI NIH HHS
ID : U24 CA224316
Pays : United States
Organisme : NCI NIH HHS
ID : U24 CA224331
Pays : United States
Organisme : NCI NIH HHS
ID : U24 CA224285
Pays : United States
Organisme : NCI NIH HHS
ID : P50 CA070907
Pays : United States
Organisme : NCI NIH HHS
ID : HHSN261201600002C
Pays : United States
Organisme : NCI NIH HHS
ID : U24 CA224309
Pays : United States
Informations de copyright
©2021 American Association for Cancer Research.
Références
Cell. 2017 Feb 9;168(4):707-723
pubmed: 28187290
Science. 2015 Apr 3;348(6230):124-8
pubmed: 25765070
J Thorac Oncol. 2017 Feb;12(2):208-222
pubmed: 27913228
Nat Rev Drug Discov. 2019 Nov;18(12):899-900
pubmed: 31780841
J Transl Med. 2016 Aug 02;14(1):232
pubmed: 27484791
Cell. 2016 Mar 24;165(1):35-44
pubmed: 26997480
BMC Bioinformatics. 2016 Oct 3;17(1):404
pubmed: 27716038
Sci Transl Med. 2017 Mar 1;9(379):
pubmed: 28251903
Curr Protoc Bioinformatics. 2013;43:11.10.1-11.10.33
pubmed: 25431634
Cancer J. 2018 May/Jun;24(3):111-114
pubmed: 30273184
Nature. 2015 Jul 9;523(7559):231-5
pubmed: 25970248
J Immunother Cancer. 2016 Nov 15;4:76
pubmed: 27895917
Science. 2016 Jul 22;353(6297):399-403
pubmed: 27463676
N Engl J Med. 2014 Dec 4;371(23):2189-2199
pubmed: 25409260
Clin Epigenetics. 2017 May 11;9:51
pubmed: 28503213
Sci Rep. 2017 Oct 17;7(1):13380
pubmed: 29042640
Front Immunol. 2019 Jun 11;10:1315
pubmed: 31244854
J Clin Invest. 2017 Aug 1;127(8):2930-2940
pubmed: 28650338
Cancer Invest. 2013 Jun;31(5):336-45
pubmed: 23641913
Genome Med. 2017 Apr 19;9(1):34
pubmed: 28420421
J Clin Oncol. 2016 Dec;34(34):4102-4109
pubmed: 27863197
Nature. 2014 Nov 27;515(7528):568-71
pubmed: 25428505
Clin Cancer Res. 2018 Apr 15;24(8):1872-1880
pubmed: 29330207
Proc Natl Acad Sci U S A. 2016 May 24;113(21):5999-6004
pubmed: 27162338
N Engl J Med. 2015 May 21;372(21):2018-28
pubmed: 25891174
Sci Immunol. 2016 Jul 14;1(1):aaf6925
pubmed: 28783673
Science. 2016 Mar 25;351(6280):1463-9
pubmed: 26940869
Nat Methods. 2013 Dec;10(12):1213-8
pubmed: 24097267
Sci Transl Med. 2011 Nov 9;3(108):108ps44
pubmed: 22072636
Cytometry A. 2019 Feb;95(2):156-172
pubmed: 30277658
Nat Methods. 2018 Jul;15(7):475-476
pubmed: 29967506
Cell. 2019 Jan 10;176(1-2):404
pubmed: 30633907
N Engl J Med. 2016 Sep 1;375(9):819-29
pubmed: 27433843
Science. 2017 Jul 28;357(6349):409-413
pubmed: 28596308