Automated segmentation of endometrial cancer on MR images using deep learning.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
08 01 2021
Historique:
received: 13 03 2020
accepted: 10 12 2020
entrez: 9 1 2021
pubmed: 10 1 2021
medline: 10 8 2021
Statut: epublish

Résumé

Preoperative MR imaging in endometrial cancer patients provides valuable information on local tumor extent, which routinely guides choice of surgical procedure and adjuvant therapy. Furthermore, whole-volume tumor analyses of MR images may provide radiomic tumor signatures potentially relevant for better individualization and optimization of treatment. We apply a convolutional neural network for automatic tumor segmentation in endometrial cancer patients, enabling automated extraction of tumor texture parameters and tumor volume. The network was trained, validated and tested on a cohort of 139 endometrial cancer patients based on preoperative pelvic imaging. The algorithm was able to retrieve tumor volumes comparable to human expert level (likelihood-ratio test, [Formula: see text]). The network was also able to provide a set of segmentation masks with human agreement not different from inter-rater agreement of human experts (Wilcoxon signed rank test, [Formula: see text], [Formula: see text], and [Formula: see text]). An automatic tool for tumor segmentation in endometrial cancer patients enables automated extraction of tumor volume and whole-volume tumor texture features. This approach represents a promising method for automatic radiomic tumor profiling with potential relevance for better prognostication and individualization of therapeutic strategy in endometrial cancer.

Identifiants

pubmed: 33420205
doi: 10.1038/s41598-020-80068-9
pii: 10.1038/s41598-020-80068-9
pmc: PMC7794479
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

179

Subventions

Organisme : Trond Mohn Foundation
ID : BFS2018TMT06

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Auteurs

Erlend Hodneland (E)

NORCE Norwegian Research Centre, Bergen, Norway. erlend.hodneland@uib.no.
Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway. erlend.hodneland@uib.no.
Department of Mathematics, University of Bergen, Bergen, Norway. erlend.hodneland@uib.no.

Julie A Dybvik (JA)

Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
Section for Radiology, Department of Clinical Medicine, University of Bergen, Bergen, Norway.

Kari S Wagner-Larsen (KS)

Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
Section for Radiology, Department of Clinical Medicine, University of Bergen, Bergen, Norway.

Veronika Šoltészová (V)

NORCE Norwegian Research Centre, Bergen, Norway.
Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.

Antonella Z Munthe-Kaas (AZ)

Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
Department of Mathematics, University of Bergen, Bergen, Norway.

Kristine E Fasmer (KE)

Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
Section for Radiology, Department of Clinical Medicine, University of Bergen, Bergen, Norway.

Camilla Krakstad (C)

Department of Clinical Science, Centre for Cancer Biomarkers, University of Bergen, Bergen, Norway.
Department of Obstetrics and Gynecology, Haukeland University Hospital, Bergen, Norway.

Arvid Lundervold (A)

Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
Department of Biomedicine, University of Bergen, Bergen, Norway.

Alexander S Lundervold (AS)

Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
Western Norway University of Applied Sciences, Bergen, Norway.

Øyvind Salvesen (Ø)

Department of Public Health and General Practice, Norwegian University of Science and Technology, Trondheim, Norway.

Bradley J Erickson (BJ)

Department of Radiology, Mayo Clinic, Rochester, MN, USA.

Ingfrid Haldorsen (I)

Department of Radiology, MMIV Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Bergen, Norway.
Section for Radiology, Department of Clinical Medicine, University of Bergen, Bergen, Norway.

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