Spatiotemporal clustering and Random Forest models to identify risk factors of African swine fever outbreak in Romania in 2018-2019.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
22 01 2021
Historique:
received: 25 02 2020
accepted: 06 01 2021
entrez: 23 1 2021
pubmed: 24 1 2021
medline: 14 10 2021
Statut: epublish

Résumé

African swine fever (ASF) has affected Romania since July 2017, with considerable economic and social consequences, despite the implementation of control measures mainly based on stamping out of infected pig populations. On the basis of the 2973 cumulative recorded cases up to September 2019 among wild boars and domestic pigs, analysis of the epidemiological characteristics could help to identify the factors favoring the persistence and spread of ASF. A statistical framework, based on a random forest methodology, was therefore developed to assess the spatiotemporal features of the epidemics and their relationships with environmental, human, and agricultural factors. The landscape of Romania was associated with the infection dynamics, particularly concerning forested and wetland areas. Waterways were also identified as a pivotal factor, raising questions about possible waterborne transmission since these waterways are often used as a water supply for backyard holdings. However, human activity was clearly identified as the main risk factor for the spread of ASF. Although the situation in Romania cannot be directly transposed to intensive pig farming countries, the findings of this study highlight the need for strict biosecurity measures on farms, and during transportation, to avoid ASF transmission at large geographic and temporal scales.

Identifiants

pubmed: 33483559
doi: 10.1038/s41598-021-81329-x
pii: 10.1038/s41598-021-81329-x
pmc: PMC7822963
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

2098

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Auteurs

Mathieu Andraud (M)

Epidemiology, Health and Welfare Research Unit, Ploufragan-Plouzané-Niort Laboratory, Anses, French Agency for Food, Environmental and Occupational Health & Safety, 22440, Ploufragan, France. mathieu.andraud@anses.fr.

Stéphanie Bougeard (S)

Epidemiology, Health and Welfare Research Unit, Ploufragan-Plouzané-Niort Laboratory, Anses, French Agency for Food, Environmental and Occupational Health & Safety, 22440, Ploufragan, France.

Theodora Chesnoiu (T)

ANSVSA (Autoritatea Națională Sanitară Veterinară și pentru Siguranța Alimentelor), Piaţa Presei Libere nr. 1, Corp D1, Sector 1, 013701, Bucharest, Romania.

Nicolas Rose (N)

Epidemiology, Health and Welfare Research Unit, Ploufragan-Plouzané-Niort Laboratory, Anses, French Agency for Food, Environmental and Occupational Health & Safety, 22440, Ploufragan, France.

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Classifications MeSH