Wine Terroir and the Soil Bacteria: An Amplicon Sequencing-Based Assessment of the Barossa Valley and Its Sub-Regions.
16SrRNA
Barossa Valley
Illumina
soil microbiome
terroir
vineyard soil bacteria
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2020
2020
Historique:
received:
22
08
2020
accepted:
04
12
2020
entrez:
25
1
2021
pubmed:
26
1
2021
medline:
26
1
2021
Statut:
epublish
Résumé
A wines' terroir, represented as wine traits with regional distinctiveness, is a reflection of both the biophysical and human-driven conditions in which the grapes were grown and wine made. Soil is an important factor contributing to the uniqueness of a wine produced by vines grown in specific conditions. Here, we evaluated the impact of environmental variables on the soil bacteria of 22 Barossa Valley vineyard sites based on the 16S rRNA gene hypervariable region 4. In this study, we report that both dispersal isolation by geographic distance and environmental heterogeneity (soil plant-available P content, elevation, rainfall, temperature, spacing between row and spacing between vine) contribute to microbial community dissimilarity between vineyards. Vineyards located in cooler and wetter regions showed lower beta diversity and a higher ratio of dominant taxa. Differences in soil bacterial community composition were significantly associated with differences in fruit and wine composition. Our results suggest that environmental factors affecting wine terroir, may be mediated by changes in microbial structure, thus providing a basic understanding of how growing conditions affect interactions between plants and their soil bacteria.
Identifiants
pubmed: 33488543
doi: 10.3389/fmicb.2020.597944
pmc: PMC7817890
doi:
Types de publication
Journal Article
Langues
eng
Pagination
597944Informations de copyright
Copyright © 2021 Zhou, Cavagnaro, De Bei, Nelson, Stephen, Metcalfe, Gilliham, Breen, Collins and Rodríguez López.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Références
Microbiome. 2017 Mar 3;5(1):27
pubmed: 28253908
Appl Environ Microbiol. 2006 Jul;72(7):5069-72
pubmed: 16820507
ISME J. 2010 Sep;4(9):1099-107
pubmed: 20376100
Appl Environ Microbiol. 2003 Mar;69(3):1800-9
pubmed: 12620873
Microbiome. 2018 Jan 16;6(1):14
pubmed: 29338764
Appl Environ Microbiol. 2008 Feb;74(3):738-44
pubmed: 18083870
Environ Microbiol Rep. 2017 Dec;9(6):742-749
pubmed: 28892290
Sci Rep. 2017 Jan 04;7:40093
pubmed: 28051171
Nat Commun. 2013;4:1434
pubmed: 23385579
PLoS One. 2014 Mar 26;9(3):e92958
pubmed: 24671113
Int J Food Microbiol. 2012 Feb 15;153(3):243-59
pubmed: 22189021
Bioinformatics. 2012 Oct 1;28(19):2537-9
pubmed: 22820204
PLoS One. 2013 Jul 03;8(7):e67948
pubmed: 23844136
PLoS One. 2013 Jul 29;8(7):e69885
pubmed: 23922841
Nat Rev Microbiol. 2013 Nov;11(11):789-99
pubmed: 24056930
Methods Enzymol. 2013;531:371-444
pubmed: 24060131
PLoS One. 2017 Oct 26;12(10):e0185056
pubmed: 29073143
Nature. 2010 Jul 1;466(7302):109-12
pubmed: 20596021
Microb Ecol. 2011 Jul;62(1):188-97
pubmed: 21625971
mBio. 2016 Jun 14;7(3):
pubmed: 27302757
Appl Environ Microbiol. 2016 Dec 15;83(1):
pubmed: 27793827
Antonie Van Leeuwenhoek. 2015 Feb;107(2):575-88
pubmed: 25527391
Nature. 2009 Apr 2;458(7238):623-6
pubmed: 19270679
Sci Rep. 2015 May 06;5:10007
pubmed: 25943705
Proc Natl Acad Sci U S A. 2006 Jan 17;103(3):626-31
pubmed: 16407148
Ann N Y Acad Sci. 2008 Mar;1125:1-43
pubmed: 18378585
Sci Rep. 2016 Oct 11;6:35046
pubmed: 27725750
Mol Ecol. 2016 May;25(10):2244-57
pubmed: 26994316
Appl Environ Microbiol. 2010 Jul;76(14):4744-9
pubmed: 20495051
Nat Commun. 2016 Jul 12;7:12151
pubmed: 27402057
Appl Environ Microbiol. 2007 Aug;73(16):5261-7
pubmed: 17586664
ISME J. 2009 Sep;3(9):1004-11
pubmed: 19440233
ISME J. 2012 Mar;6(3):610-8
pubmed: 22134646
Gigascience. 2013 Nov 26;2(1):16
pubmed: 24280061
Bioinformatics. 2010 Oct 1;26(19):2460-1
pubmed: 20709691
Environ Microbiol Rep. 2012 Jun;4(3):367-72
pubmed: 23760801
ISME J. 2011 May;5(5):908-17
pubmed: 21085198
Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4516-22
pubmed: 20534432
Front Microbiol. 2019 Nov 20;10:2679
pubmed: 31824462
PLoS One. 2015 Apr 21;10(4):e0122221
pubmed: 25898319
Mol Ecol. 2010 Oct;19(19):4315-27
pubmed: 25241408
FEMS Microbiol Ecol. 2014 May;88(2):424-35
pubmed: 24597529
Front Microbiol. 2019 Jul 16;10:1607
pubmed: 31379773
mBio. 2015 Mar 24;6(2):
pubmed: 25805735
mSphere. 2020 Aug 12;5(4):
pubmed: 32817452
Appl Environ Microbiol. 2010 Feb;76(4):999-1007
pubmed: 20023089
Appl Environ Microbiol. 2009 Aug;75(15):5111-20
pubmed: 19502440
Bioinformatics. 2010 Jan 15;26(2):266-7
pubmed: 19914921
Appl Environ Microbiol. 2005 Dec;71(12):8228-35
pubmed: 16332807
Ecol Appl. 2011 Jul;21(5):1696-707
pubmed: 21830711
PLoS One. 2013 Aug 30;8(8):e73013
pubmed: 24023666
Front Plant Sci. 2017 Jun 20;8:1065
pubmed: 28676813
New Phytol. 2013 Apr;198(1):264-73
pubmed: 23347044
Plant Dis. 2010 Nov;94(11):1329-1335
pubmed: 30743621
Front Microbiol. 2018 May 15;9:946
pubmed: 29867854
Genome Res. 2009 Oct;19(10):1896-904
pubmed: 19635847
Proc Natl Acad Sci U S A. 2018 Jul 10;115(28):7368-7373
pubmed: 29941552
Appl Environ Microbiol. 2001 Sep;67(9):4215-24
pubmed: 11526026
ISME J. 2010 Oct;4(10):1340-51
pubmed: 20445636
J Agric Food Chem. 2007 Jun 13;55(12):4651-7
pubmed: 17497877
Adv Appl Microbiol. 2016;94:109-59
pubmed: 26917243