Particle swarm optimizer for arterial blood flow models.

Computational medicine Model parameters identification Particle swarm optimization (PSO) Pulsatile blood flow Windkessel model

Journal

Computer methods and programs in biomedicine
ISSN: 1872-7565
Titre abrégé: Comput Methods Programs Biomed
Pays: Ireland
ID NLM: 8506513

Informations de publication

Date de publication:
Apr 2021
Historique:
received: 28 08 2020
accepted: 05 01 2021
pubmed: 1 2 2021
medline: 15 5 2021
entrez: 31 1 2021
Statut: ppublish

Résumé

Mathematical modeling and computational simulations of arterial blood flow network can offer an insilico platform for both diagnostics and therapeutic phases of patients that suffer from cardiac diseases. These models are normally complex and involve many unknown parameters. For physiological relevance, these parameters should be optimized using in-vivo human/animal data sets. The main goal of this work is to develop an efficient, yet an accurate optimization algorithm to compute parameters in the arterial blood flow models. The particle swarm optimization (PSO) method is proposed herein for the first time, as an accurate algorithm that applies to computing parameters in the Windkessel type model of blood flow in the arterial system. We begin by defining a 6-element Windkessel (WK6) arterial flow model, which is then implemented and validated using multiple flow rate and aortic pressure measurements obtained from different subjects including dogs, pigs and humans. The parameters in the model are obtained using the PSO technique which minimizes the pressure root mean square (P-RMS) error between the computed and the measured aortic pressure waveform. Model parameters obtained using the proposed PSO method were able to recover the pressure waveform in the aorta during the cardiac cycle for both healthy and diseased species (animals/humans). The PSO method provides an accurate approach to solve this challenging multi-dimensional parameter identification problem. The results obtained by PSO algorithm was compared with the classical gradient-based, namely the non-linear square fit (NLSF) algorithm. The results indicate that the PSO method offers alternative and accurate method to find optimal physiological parameters involved in the Windkessel model for the study of arterial blood flow network. The PSO method has performed better than the NLSF approach as depicted from the P-RMS calculations. Finally, we believe that the PSO method offers a great potential and could be used for many other biomedicine optimization problems.

Sections du résumé

BACKGROUND AND OBJECTIVE OBJECTIVE
Mathematical modeling and computational simulations of arterial blood flow network can offer an insilico platform for both diagnostics and therapeutic phases of patients that suffer from cardiac diseases. These models are normally complex and involve many unknown parameters. For physiological relevance, these parameters should be optimized using in-vivo human/animal data sets. The main goal of this work is to develop an efficient, yet an accurate optimization algorithm to compute parameters in the arterial blood flow models.
METHODS METHODS
The particle swarm optimization (PSO) method is proposed herein for the first time, as an accurate algorithm that applies to computing parameters in the Windkessel type model of blood flow in the arterial system. We begin by defining a 6-element Windkessel (WK6) arterial flow model, which is then implemented and validated using multiple flow rate and aortic pressure measurements obtained from different subjects including dogs, pigs and humans. The parameters in the model are obtained using the PSO technique which minimizes the pressure root mean square (P-RMS) error between the computed and the measured aortic pressure waveform.
RESULTS RESULTS
Model parameters obtained using the proposed PSO method were able to recover the pressure waveform in the aorta during the cardiac cycle for both healthy and diseased species (animals/humans). The PSO method provides an accurate approach to solve this challenging multi-dimensional parameter identification problem. The results obtained by PSO algorithm was compared with the classical gradient-based, namely the non-linear square fit (NLSF) algorithm.
CONCLUSIONS CONCLUSIONS
The results indicate that the PSO method offers alternative and accurate method to find optimal physiological parameters involved in the Windkessel model for the study of arterial blood flow network. The PSO method has performed better than the NLSF approach as depicted from the P-RMS calculations. Finally, we believe that the PSO method offers a great potential and could be used for many other biomedicine optimization problems.

Identifiants

pubmed: 33517234
pii: S0169-2607(21)00007-9
doi: 10.1016/j.cmpb.2021.105933
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

105933

Informations de copyright

Copyright © 2021. Published by Elsevier B.V.

Déclaration de conflit d'intérêts

Declaration of Competing Interest No conflicts of interest, financial or otherwise, are declared by the authors.

Auteurs

Yasser Aboelkassem (Y)

Department of Mechanical Engineering, San Diego State University, USA. Electronic address: yaboelkassem@sdsu.edu.

Dragana Savic (D)

Radcliffe Department of Medicine, University of Oxford, UK.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH