Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Setting-specific Transmission Rates: A Systematic Review and Meta-analysis.

COVID-19 SARS-CoV-2 contact tracing secondary attack rate transmission

Journal

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
ISSN: 1537-6591
Titre abrégé: Clin Infect Dis
Pays: United States
ID NLM: 9203213

Informations de publication

Date de publication:
02 08 2021
Historique:
received: 30 11 2020
pubmed: 10 2 2021
medline: 7 8 2021
entrez: 9 2 2021
Statut: ppublish

Résumé

Understanding the drivers of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission is crucial for control policies, but evidence of transmission rates in different settings remains limited. We conducted a systematic review to estimate secondary attack rates (SARs) and observed reproduction numbers (Robs) in different settings exploring differences by age, symptom status, and duration of exposure. To account for additional study heterogeneity, we employed a beta-binomial model to pool SARs across studies and a negative-binomial model to estimate Robs. Households showed the highest transmission rates, with a pooled SAR of 21.1% (95% confidence interval [CI]:17.4-24.8). SARs were significantly higher where the duration of household exposure exceeded 5 days compared with exposure of ≤5 days. SARs related to contacts at social events with family and friends were higher than those for low-risk casual contacts (5.9% vs 1.2%). Estimates of SARs and Robs for asymptomatic index cases were approximately one-seventh, and for presymptomatic two-thirds of those for symptomatic index cases. We found some evidence for reduced transmission potential both from and to individuals younger than 20 years of age in the household context, which is more limited when examining all settings. Our results suggest that exposure in settings with familiar contacts increases SARS-CoV-2 transmission potential. Additionally, the differences observed in transmissibility by index case symptom status and duration of exposure have important implications for control strategies, such as contact tracing, testing, and rapid isolation of cases. There were limited data to explore transmission patterns in workplaces, schools, and care homes, highlighting the need for further research in such settings.

Sections du résumé

BACKGROUND
Understanding the drivers of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission is crucial for control policies, but evidence of transmission rates in different settings remains limited.
METHODS
We conducted a systematic review to estimate secondary attack rates (SARs) and observed reproduction numbers (Robs) in different settings exploring differences by age, symptom status, and duration of exposure. To account for additional study heterogeneity, we employed a beta-binomial model to pool SARs across studies and a negative-binomial model to estimate Robs.
RESULTS
Households showed the highest transmission rates, with a pooled SAR of 21.1% (95% confidence interval [CI]:17.4-24.8). SARs were significantly higher where the duration of household exposure exceeded 5 days compared with exposure of ≤5 days. SARs related to contacts at social events with family and friends were higher than those for low-risk casual contacts (5.9% vs 1.2%). Estimates of SARs and Robs for asymptomatic index cases were approximately one-seventh, and for presymptomatic two-thirds of those for symptomatic index cases. We found some evidence for reduced transmission potential both from and to individuals younger than 20 years of age in the household context, which is more limited when examining all settings.
CONCLUSIONS
Our results suggest that exposure in settings with familiar contacts increases SARS-CoV-2 transmission potential. Additionally, the differences observed in transmissibility by index case symptom status and duration of exposure have important implications for control strategies, such as contact tracing, testing, and rapid isolation of cases. There were limited data to explore transmission patterns in workplaces, schools, and care homes, highlighting the need for further research in such settings.

Identifiants

pubmed: 33560412
pii: 6131730
doi: 10.1093/cid/ciab100
pmc: PMC7929012
doi:

Types de publication

Journal Article Meta-Analysis Research Support, Non-U.S. Gov't Systematic Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

e754-e764

Subventions

Organisme : Medical Research Council
ID : MC_PC_19012
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/R015600/1
Pays : United Kingdom
Organisme : Department of Health
Pays : United Kingdom

Informations de copyright

© The Author(s) 2021. Published by Oxford University Press for the Infectious Diseases Society of America.

Références

J Infect. 2020 Sep;81(3):420-426
pubmed: 32504745
Emerg Infect Dis. 2020 Nov;26(11):2598-2606
pubmed: 33035448
Clin Infect Dis. 2021 Oct 5;73(7):e1841-e1849
pubmed: 32719874
Eur Respir J. 2020 Jun 4;55(6):
pubmed: 32366488
Nat Med. 2020 Nov;26(11):1714-1719
pubmed: 32943787
Emerg Infect Dis. 2020 Aug;26(8):1666-1670
pubmed: 32324530
PLoS One. 2020 Sep 2;15(9):e0238342
pubmed: 32877446
Euro Surveill. 2007 May 01;12(5):E3-4
pubmed: 17991395
Am J Otolaryngol. 2020 Sep - Oct;41(5):102573
pubmed: 32531620
Bioinformatics. 2010 Feb 1;26(3):363-9
pubmed: 20007255
J Pediatr. 2020 Oct;225:249-251
pubmed: 32634405
JAMA Pediatr. 2021 Jan 1;175(1):73-80
pubmed: 32857112
Clin Infect Dis. 2020 Nov 19;71(16):2099-2108
pubmed: 32392331
Public Health. 2020 Aug;185:57-59
pubmed: 32563739
Clin Infect Dis. 2020 Nov 5;71(8):1943-1946
pubmed: 32301964
Zhonghua Liu Xing Bing Xue Za Zhi. 2020 Dec 10;41(12):2024-2028
pubmed: 32340093
BMC Infect Dis. 2020 Jul 20;20(1):526
pubmed: 32689956
Emerg Infect Dis. 2020 Aug;26(8):1935-1937
pubmed: 32392125
Wellcome Open Res. 2020 Apr 9;5:67
pubmed: 32685698
J Infect Dis. 2020 Jun 11;221(12):1948-1952
pubmed: 32319519
Emerg Infect Dis. 2020 Sep;26(9):
pubmed: 32553070
BMJ Glob Health. 2020 May;5(5):
pubmed: 32467353
PLoS Med. 2020 Sep 22;17(9):e1003346
pubmed: 32960881
Ned Tijdschr Geneeskd. 2020 Jun 3;164:
pubmed: 32749807
Lancet Infect Dis. 2020 Aug;20(8):911-919
pubmed: 32353347
Zhonghua Yu Fang Yi Xue Za Zhi. 2020 Jun 6;54(6):625-629
pubmed: 32171192
Proc Natl Acad Sci U S A. 2020 Jul 28;117(30):17513-17515
pubmed: 32632012
Epidemiology. 2012 Jul;23(4):531-42
pubmed: 22561117
Science. 2020 Jun 26;368(6498):1481-1486
pubmed: 32350060
Euro Surveill. 2009 Aug 20;14(33):
pubmed: 19712642
Clin Microbiol Infect. 2020 Oct;26(10):1413.e9-1413.e13
pubmed: 32569835
Emerg Infect Dis. 2020 Aug;26(8):1924-1926
pubmed: 32453686
Lancet Infect Dis. 2020 Jun;20(6):669-677
pubmed: 32240634
Emerg Infect Dis. 2020 Sep;26(9):
pubmed: 32433907
Transbound Emerg Dis. 2021 Mar;68(2):782-788
pubmed: 32688447
Acta Paediatr. 2020 Oct;109(10):1948-1955
pubmed: 32557789
Eur J Vasc Endovasc Surg. 2020 Jul;60(1):127-134
pubmed: 32499169
Int J Infect Dis. 2020 Oct;99:325-327
pubmed: 32544669
Science. 2020 Jul 10;369(6500):208-211
pubmed: 32404476
Emerg Infect Dis. 2004 Feb;10(2):235-43
pubmed: 15030689
J Infect. 2020 Jun;80(6):e1-e13
pubmed: 32283156
Euro Surveill. 2020 Apr;25(16):
pubmed: 32347198
Clin Infect Dis. 2020 Nov 5;71(8):1953-1959
pubmed: 32382743
Euro Surveill. 2020 Jul;25(29):
pubmed: 32720636
Biometrics. 1975 Dec;31(4):949-52
pubmed: 1203435
Virus Res. 2020 Sep;286:198043
pubmed: 32502551
JAMA Intern Med. 2020 Sep 1;180(9):1156-1163
pubmed: 32356867
Emerg Infect Dis. 2020 Oct;26(10):2465-2468
pubmed: 32673193
Indoor Air. 2021 May;31(3):639-645
pubmed: 33131151
Emerg Microbes Infect. 2020 Dec;9(1):1546-1553
pubmed: 32608325
Pediatr Pulmonol. 2020 Aug;55(8):2115-2127
pubmed: 32519809
JAMA Netw Open. 2020 Dec 1;3(12):e2031756
pubmed: 33315116
BMC Med Res Methodol. 2008 Aug 19;8:58
pubmed: 18713448
Trends Microbiol. 2016 Feb;24(2):123-133
pubmed: 26612500
J Travel Med. 2020 Aug 20;27(5):
pubmed: 32584403
Lancet Infect Dis. 2020 Aug;20(8):920-928
pubmed: 32422201
Emerg Infect Dis. 2020 Aug;26(8):1917-1920
pubmed: 32412896
Emerg Infect Dis. 2004 Feb;10(2):232-4
pubmed: 15030688
Lancet Infect Dis. 2020 Oct;20(10):1141-1150
pubmed: 32562601
Infect Control Hosp Epidemiol. 2020 Jul;41(7):820-825
pubmed: 32381147
J Glob Infect Dis. 2020 May 22;12(2):115-116
pubmed: 32774003
CMAJ. 2003 Aug 19;169(4):285-92
pubmed: 12925421
Zhonghua Liu Xing Bing Xue Za Zhi. 2020 May 10;41(5):638-641
pubmed: 32164400
PLoS Comput Biol. 2021 Feb 11;17(2):e1008559
pubmed: 33571188
Lancet Child Adolesc Health. 2020 Sep;4(9):653-661
pubmed: 32593339
Ann Intern Med. 2003 Oct 7;139(7):564-7
pubmed: 14530227
Clin Infect Dis. 2020 Jul 28;71(15):825-832
pubmed: 32277759
Travel Med Infect Dis. 2020 Jul - Aug;36:101803
pubmed: 32592903
PLoS One. 2020 Oct 8;15(10):e0240205
pubmed: 33031427
Clin Infect Dis. 2021 Feb 16;72(4):682-685
pubmed: 32562541
Lancet. 2020 Aug 22;396(10250):535-544
pubmed: 32645347

Auteurs

Hayley A Thompson (HA)

MRC Centre for Global Infectious Disease Analysis & World Health Organization Collaborating Centre for Infectious Disease Modelling, Abdul Latif Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK.

Andria Mousa (A)

MRC Centre for Global Infectious Disease Analysis & World Health Organization Collaborating Centre for Infectious Disease Modelling, Abdul Latif Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK.

Amy Dighe (A)

MRC Centre for Global Infectious Disease Analysis & World Health Organization Collaborating Centre for Infectious Disease Modelling, Abdul Latif Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK.

Han Fu (H)

MRC Centre for Global Infectious Disease Analysis & World Health Organization Collaborating Centre for Infectious Disease Modelling, Abdul Latif Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK.

Alberto Arnedo-Pena (A)

Sección de Epidemiología, Centro de Salud Pública de Castellón, Valencia, Spain.
Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Valencia, Spain.

Peter Barrett (P)

School of Public Health, University College Cork, Cork, Ireland.
Irish Centre for Maternal and Child Health Research (INFANT), University College Cork, Cork, Ireland.

Juan Bellido-Blasco (J)

Sección de Epidemiología, Centro de Salud Pública de Castellón, Valencia, Spain.
Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Valencia, Spain.
Facultad de Ciencias de la Salud, Universitat Jaime I (UJI), Castelló, Spain.

Qifang Bi (Q)

Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA.

Antonio Caputi (A)

Interdisciplinary Department of Medicine, University of Bari, Unit of Occupational Medicine, University Hospital of Bari, Bari, Italy.

Liling Chaw (L)

PAPRSB Institute of Health Sciences, Universiti Brunei Darussalam, Jalan Tungku Link, Brunei.

Luigi De Maria (L)

Interdisciplinary Department of Medicine, University of Bari, Unit of Occupational Medicine, University Hospital of Bari, Bari, Italy.

Matthias Hoffmann (M)

Division of General Internal Medicine, Infectious Diseases and Hospital Epidemiology, Cantonal Hospital Olten, Olten, Switzerland.

Kiran Mahapure (K)

Department of Plastic Surgery, Dr Prabhakar Kore Hospital and MRC, Belgaum, Karnataka, India.

Kangqi Ng (K)

Changi General Hospital, Singapore.

Jagadesan Raghuram (J)

Changi General Hospital, Singapore.

Gurpreet Singh (G)

Sree Chitra Tirunal Institute for Medical Sciences and Technology, Thiruvananthapuram, Kerala, India.

Biju Soman (B)

Sree Chitra Tirunal Institute for Medical Sciences and Technology, Thiruvananthapuram, Kerala, India.

Vicente Soriano (V)

UNIR Health Sciences School & Medical Center, Madrid, Spain.

Francesca Valent (F)

SOC Istituto di Igiene ed Epidemiologia Clinica, Azienda Sanitaria Universitaria Friuli Centrale, Udine, Italy.

Luigi Vimercati (L)

Interdisciplinary Department of Medicine, University of Bari, Unit of Occupational Medicine, University Hospital of Bari, Bari, Italy.

Liang En Wee (LE)

Department of Infectious Diseases, Singapore General Hospital, Singapore, Singapore.

Justin Wong (J)

PAPRSB Institute of Health Sciences, Universiti Brunei Darussalam, Jalan Tungku Link, Brunei.
Disease Control Division, Ministry of Health, Brunei.

Azra C Ghani (AC)

MRC Centre for Global Infectious Disease Analysis & World Health Organization Collaborating Centre for Infectious Disease Modelling, Abdul Latif Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK.

Neil M Ferguson (NM)

MRC Centre for Global Infectious Disease Analysis & World Health Organization Collaborating Centre for Infectious Disease Modelling, Abdul Latif Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH