Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures.
Adult
Algorithms
Computational Biology
/ methods
Female
Healthy Volunteers
High-Throughput Screening Assays
/ methods
Humans
Lymphocytes
/ radiation effects
Machine Learning
Male
Micronucleus Tests
/ methods
Neutrons
/ adverse effects
Photons
/ adverse effects
Radiation Dosage
Radiation Exposure
/ adverse effects
Radiometry
/ methods
Journal
Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288
Informations de publication
Date de publication:
17 02 2021
17 02 2021
Historique:
received:
29
10
2020
accepted:
04
02
2021
entrez:
18
2
2021
pubmed:
19
2
2021
medline:
22
12
2021
Statut:
epublish
Résumé
We implemented machine learning in the radiation biodosimetry field to quantitatively reconstruct neutron doses in mixed neutron + photon exposures, which are expected in improvised nuclear device detonations. Such individualized reconstructions are crucial for triage and treatment because neutrons are more biologically damaging than photons. We used a high-throughput micronucleus assay with automated scanning/imaging on lymphocytes from human blood ex-vivo irradiated with 44 different combinations of 0-4 Gy neutrons and 0-15 Gy photons (542 blood samples), which include reanalysis of past experiments. We developed several metrics that describe micronuclei/cell probability distributions in binucleated cells, and used them as predictors in random forest (RF) and XGboost machine learning analyses to reconstruct the neutron dose in each sample. The probability of "overfitting" was minimized by training both algorithms with repeated cross-validation on a randomly-selected subset of the data, and measuring performance on the rest. RF achieved the best performance. Mean R
Identifiants
pubmed: 33597632
doi: 10.1038/s41598-021-83575-5
pii: 10.1038/s41598-021-83575-5
pmc: PMC7889851
doi:
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
4022Subventions
Organisme : NIAID NIH HHS
ID : U19 AI067773
Pays : United States
Références
Nucl Instrum Methods Phys Res A. 2015 Sep 11;794:234-239
pubmed: 26273118
Int J Radiat Biol. 2017 Jan;93(1):15-19
pubmed: 27778526
Front Microbiol. 2019 Apr 18;10:827
pubmed: 31057526
Radiat Environ Biophys. 1979 Apr 30;16(2):89-100
pubmed: 472118
Radiat Environ Biophys. 1996 Aug;35(3):179-84
pubmed: 8880960
Radiat Prot Dosimetry. 2016 Sep;171(1):85-98
pubmed: 27590469
Radiat Prot Dosimetry. 2016 Dec;172(1-3):38-46
pubmed: 27473694
Radiat Res. 2019 Apr;191(4):342-351
pubmed: 30779694
Radiat Res. 2017 Apr;187(4):465-475
pubmed: 28211757
J Instrum. 2012 Mar 16;7(3):
pubmed: 22545061
Nat Rev Mol Cell Biol. 2019 Nov;20(11):659-660
pubmed: 31548714
Radiat Res. 2019 Sep;192(3):311-323
pubmed: 31295087
Radiat Res. 1983 Mar;93(3):506-15
pubmed: 6344126
Genome Integr. 2016 Dec 30;7:11
pubmed: 28217287
Mutat Res. 2019 Nov;847:503087
pubmed: 31699339
Int J Radiat Biol. 2020 Jan;96(1):57-66
pubmed: 30507310
Radiat Res. 2017 Apr;187(4):492-498
pubmed: 28231025
F1000Res. 2017 Aug 9;6:1396
pubmed: 29026522
PLoS One. 2020 Apr 22;15(4):e0228350
pubmed: 32320391
Sci Rep. 2020 Feb 19;10(1):2899
pubmed: 32076014
Radiat Res. 2015 Aug;184(2):134-42
pubmed: 26230078
Inf Fusion. 2019 Oct;50:71-91
pubmed: 30467459
Radiat Prot Dosimetry. 2016 Dec;172(1-3):58-71
pubmed: 27886989
J Radiat Res. 2020 Jan 23;61(1):68-72
pubmed: 31825079
Mutat Res Genet Toxicol Environ Mutagen. 2018 Dec;836(Pt A):53-64
pubmed: 30389163
Mutagenesis. 2011 Jan;26(1):11-7
pubmed: 21164177
Radiat Res. 2015 Oct;184(4):404-10
pubmed: 26414507
Health Phys. 2016 Apr;110(4):370-9
pubmed: 26910029
Radiat Prot Dosimetry. 2019 Dec 31;186(1):42-47
pubmed: 30624749