Clinostat 3D Cell Culture: Protocols for the Preparation and Functional Analysis of Highly Reproducible, Large, Uniform Spheroids and Organoids.

Biopsy Bioreactor Cell lines Clinostat Coculture High reproducibility High yield Long-term culture Organoids Protocols Spheroids Stem cells

Journal

Methods in molecular biology (Clifton, N.J.)
ISSN: 1940-6029
Titre abrégé: Methods Mol Biol
Pays: United States
ID NLM: 9214969

Informations de publication

Date de publication:
2021
Historique:
entrez: 19 2 2021
pubmed: 20 2 2021
medline: 31 3 2021
Statut: ppublish

Résumé

Growing cells as 3D structures need not be difficult. Often, it is not necessary to change cell type, additives or growth media used. All that needs to be changed is the geometry: cells (whether primary, induced pluripotent, transformed or immortal) simply have to be grown in conditions that promote cell-cell adhesion while allowing gas, nutrient, signal, and metabolite exchange. Downstream analysis can become more complicated because many assays (like phase contrast microscopy) cannot be used, but their replacements have been in use for many years. Most importantly, there is a huge gain in value in obtaining data that is more representative of the organism in vivo. It is the goal of the protocols presented here to make the transition to a new dimension as painless as possible. Grown optimally, most biopsy derived organoids will retain patient phenotypes, while cell (both stem cell, induced or otherwise or immortalized) derived organoids or spheroids will recover tissue functionality.

Identifiants

pubmed: 33604843
doi: 10.1007/978-1-0716-1246-0_2
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

17-62

Références

Barkauskas CE, Chung MI, Fioret B, Gao X, Katsura H, Hogan BL (2017) Lung organoids: current uses and future promise. Development 144(6):986–997. https://doi.org/10.1242/dev.140103
doi: 10.1242/dev.140103 pubmed: 28292845 pmcid: 5358104
Morizane R, Bonventre JV (2017) Kidney organoids: a translational journey. Trends Mol Med 23(3):246–263. https://doi.org/10.1016/j.molmed.2017.01.001
doi: 10.1016/j.molmed.2017.01.001 pubmed: 28188103 pmcid: 5442988
Pasca SP (2018) The rise of three-dimensional human brain cultures. Nature 553(7689):437–445. https://doi.org/10.1038/nature25032
doi: 10.1038/nature25032 pubmed: 29364288
Artegiani B, Clevers H (2018) Use and application of 3D-organoid technology. Hum Mol Genet 27(R2):R99–R107. https://doi.org/10.1093/hmg/ddy187
doi: 10.1093/hmg/ddy187 pubmed: 29796608
Xie J, Xu X, Yin P, Li Y, Guo H, Kujawa S, Chakravarti D, Bulun S, Kim JJ, Wei JJ (2018) Application of ex-vivo spheroid model system for the analysis of senescence and senolytic phenotypes in uterine leiomyoma. Lab Investig 98(12):1575–1587. https://doi.org/10.1038/s41374-018-0117-5
doi: 10.1038/s41374-018-0117-5 pubmed: 30206313
Laschke MW, Menger MD (2017) Life is 3D: boosting spheroid function for tissue engineering. Trends Biotechnol 35(2):133–144. https://doi.org/10.1016/j.tibtech.2016.08.004
doi: 10.1016/j.tibtech.2016.08.004 pubmed: 27634310
Llonch S, Carido M, Ader M (2018) Organoid technology for retinal repair. Dev Biol 433(2):132–143. https://doi.org/10.1016/j.ydbio.2017.09.028
doi: 10.1016/j.ydbio.2017.09.028 pubmed: 29291970
Perkhofer L, Frappart PO, Muller M, Kleger A (2018) Importance of organoids for personalized medicine. Per Med 15(6):461–465. https://doi.org/10.2217/pme-2018-0071
doi: 10.2217/pme-2018-0071 pubmed: 30418092
Toda S, Blauch LR, Tang SKY, Morsut L, Lim WA (2018) Programming self-organizing multicellular structures with synthetic cell-cell signaling. Science 361(6398):156–162. https://doi.org/10.1126/science.aat0271
doi: 10.1126/science.aat0271 pubmed: 29853554 pmcid: 6492944
Nath S, Devi GR (2016) Three-dimensional culture systems in cancer research: focus on tumor spheroid model. Pharmacol Ther 163:94–108. https://doi.org/10.1016/j.pharmthera.2016.03.013
doi: 10.1016/j.pharmthera.2016.03.013 pubmed: 27063403 pmcid: 4961208
Dayem AA, Lee SB, Kim K, Lim KM, Jeon TI, Cho SG (2019) Recent advances in organoid culture for insulin production and diabetes therapy: methods and challenges. BMB Rep 52(5):295–303
doi: 10.5483/BMBRep.2019.52.5.089
Tiriac H, Plenker D, Baker LA, Tuveson DA (2019) Organoid models for translational pancreatic cancer research. Curr Opin Genet Dev 54:7–11. https://doi.org/10.1016/j.gde.2019.02.003
doi: 10.1016/j.gde.2019.02.003 pubmed: 30844513 pmcid: 6722026
Clevers H (2016) Modeling development and disease with organoids. Cell 165(7):1586–1597. https://doi.org/10.1016/j.cell.2016.05.082
doi: 10.1016/j.cell.2016.05.082 pubmed: 27315476 pmcid: 27315476
Wang Z, Wang SN, Xu TY, Miao ZW, Su DF, Miao CY (2017) Organoid technology for brain and therapeutics research. CNS Neurosci Ther 23(10):771–778. https://doi.org/10.1111/cns.12754
doi: 10.1111/cns.12754 pubmed: 28884977 pmcid: 6492716
Vorrink SU, Zhou Y, Ingelman-Sundberg M, Lauschke VM (2018) Prediction of drug-induced hepatotoxicity using long-term stable primary hepatic 3D spheroid cultures in chemically defined conditions. Toxicol Sci 163(2):655–665. https://doi.org/10.1093/toxsci/kfy058
doi: 10.1093/toxsci/kfy058 pubmed: 29590495 pmcid: 5974779
Lauschke VM, Hendriks DF, Bell CC, Andersson TB, Ingelman-Sundberg M (2016) Novel 3D culture Systems for Studies of human liver function and assessments of the hepatotoxicity of drugs and drug candidates. Chem Res Toxicol 29(12):1936–1955. https://doi.org/10.1021/acs.chemrestox.6b00150
doi: 10.1021/acs.chemrestox.6b00150 pubmed: 27661221
Gripon P, Rumin S, Urban S, Le Seyec J, Glaise D, Cannie I, Guyomard C, Lucas J, Trepo C, Guguen-Guillouzo C (2002) Infection of a human hepatoma cell line by hepatitis B virus. Proc Natl Acad Sci U S A 99(24):15655–15660. https://doi.org/10.1073/pnas.232137699
doi: 10.1073/pnas.232137699 pubmed: 12432097 pmcid: 137772
Yin Y, Zhou D (2018) Organoid and Enteroid modeling of salmonella infection. Front Cell Infect Microbiol 8:102. https://doi.org/10.3389/fcimb.2018.00102
doi: 10.3389/fcimb.2018.00102 pubmed: 29670862 pmcid: 5894114
Ramani S, Crawford SE, Blutt SE, Estes MK (2018) Human organoid cultures: transformative new tools for human virus studies. Curr Opin Virol 29:79–86. https://doi.org/10.1016/j.coviro.2018.04.001
doi: 10.1016/j.coviro.2018.04.001 pubmed: 29656244 pmcid: 5944856
Dye BR, Hill DR, Ferguson MA, Tsai YH, Nagy MS, Dyal R, Wells JM, Mayhew CN, Nattiv R, Klein OD, White ES, Deutsch GH, Spence JR (2015) In vitro generation of human pluripotent stem cell derived lung organoids. Elife 4:e05098. https://doi.org/10.7554/eLife.05098
doi: 10.7554/eLife.05098 pmcid: 4370217
Ramaiahgari SC, Waidyanatha S, Dixon D, DeVito MJ, Paules RS, Ferguson SS (2017) Three-dimensional (3D) HepaRG spheroid model with physiologically relevant xenobiotic metabolism competence and hepatocyte functionality for liver toxicity screening. Toxicol Sci 160(1):189–190. https://doi.org/10.1093/toxsci/kfx194
doi: 10.1093/toxsci/kfx194 pubmed: 29077947 pmcid: 6790530
Bergmann S, Lawler SE, Qu Y, Fadzen CM, Wolfe JM, Regan MS, Pentelute BL, Agar NYR, Cho CF (2018) Blood-brain-barrier organoids for investigating the permeability of CNS therapeutics. Nat Protoc 13(12):2827–2843. https://doi.org/10.1038/s41596-018-0066-x
doi: 10.1038/s41596-018-0066-x pubmed: 30382243 pmcid: 6673652
Cederquist GY, Asciolla JJ, Tchieu J, Walsh RM, Cornacchia D, Resh MD, Studer L (2019) Specification of positional identity in forebrain organoids. Nat Biotechnol 37(4):436–444. https://doi.org/10.1038/s41587-019-0085-3
doi: 10.1038/s41587-019-0085-3 pubmed: 30936566 pmcid: 6447454
Kang HM, Lim JH, Noh KH, Park D, Cho HS, Susztak K, Jung CR (2019) Effective reconstruction of functional organotypic kidney spheroid for in vitro nephrotoxicity studies. Sci Rep 9(1):17610. https://doi.org/10.1038/s41598-019-53855-2
doi: 10.1038/s41598-019-53855-2 pubmed: 31772214 pmcid: 6879515
Wrzesinski K, Fey SJ (2015) From 2D to 3D - a new dimension for modelling the effect of natural products on human tissue. Curr Pharm Des 21:5605–5616
doi: 10.2174/1381612821666151002114227
Wrzesinski K, Rogowska-Wrzesinska A, Kanlaya R, Borkowski K, Schwammle V, Dai J, Joensen KE, Wojdyla K, Carvalho VB, Fey SJ (2014) The cultural divide: exponential growth in classical 2D and metabolic equilibrium in 3D environments. PLoS One 9(9):e106973. https://doi.org/10.1371/journal.pone.0106973
doi: 10.1371/journal.pone.0106973 pubmed: 25222612 pmcid: 4164521
Wrzesinski K, Fey SJ (2018) Metabolic reprogramming and the recovery of physiological functionality in 3D cultures in micro-bioreactors. Bioengineering (Basel) 5(1):22. https://doi.org/10.3390/bioengineering5010022
doi: 10.3390/bioengineering5010022
Wrzesinski K, Magnone MC, Visby Hansen L, Kruse ME, Bergauer T, Bobadilla M, Gubler M, Mizrahi J, Zhang K, Andreasen CM, Joensen KE, Andersen SM, Olesen JB, SdM OB, Fey SJ (2013) HepG2/C3A 3D spheroids exhibit stable physiological functionality for at least 24 days after recovering from trypsinisation. Toxicol Res 2(3):163–172. https://doi.org/10.1039/c3tx20086h
doi: 10.1039/c3tx20086h
Wrzesinski K, Fey SJ (2013) After trypsinisation, 3D spheroids of C3A hepatocytes need 18 days to re-establish similar levels of key physiological functions to those seen in the liver. Toxicol Res 2(2):123–135. https://doi.org/10.1039/c2tx20060k
doi: 10.1039/c2tx20060k
Fey SJ, Wrzesinski K (2012) Determination of drug toxicity using 3D spheroids constructed from an immortal human hepatocyte cell line. Toxicol Sci 127(2):403–411. https://doi.org/10.1093/toxsci/kfs122
doi: 10.1093/toxsci/kfs122 pubmed: 22454432 pmcid: 3355318
Smit T, Calitz C, Willers C, Svitina H, Hamman J, Fey SJ, Gouws C, Wrzesinski K (2020) Characterization of an alginate encapsulated LS180 spheroid model for anti-colorectal cancer compound screening. ACS Med Chem Lett 11(5):1014–1021. https://doi.org/10.1021/acsmedchemlett.0c00076
doi: 10.1021/acsmedchemlett.0c00076 pubmed: 32435419

Auteurs

Krzysztof Wrzesinski (K)

CelVivo ApS, Blommenslyst, Denmark. kwr@celvivo.com.
Pharmacen™, Centre of Excellence for Pharmaceutical Sciences, North-West University, Potchefstroom, South Africa. kwr@celvivo.com.

Helle Sedighi Frandsen (HS)

Institute for Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark.

Carlemi Calitz (C)

Department of Medical Cell Biology, Uppsala University, Uppsala, Sweden.

Chrisna Gouws (C)

Pharmacen™, Centre of Excellence for Pharmaceutical Sciences, North-West University, Potchefstroom, South Africa.

Barbara Korzeniowska (B)

CelVivo ApS, Blommenslyst, Denmark.

Stephen J Fey (SJ)

CelVivo ApS, Blommenslyst, Denmark.

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