Integrative Base Ontology for the Research Analysis of Alzheimer's Disease-Related Mild Cognitive Impairment.

Alzheimer’s disease MCI neurodegenerative disease neuropsychological tests ontology ontology design

Journal

Frontiers in neuroinformatics
ISSN: 1662-5196
Titre abrégé: Front Neuroinform
Pays: Switzerland
ID NLM: 101477957

Informations de publication

Date de publication:
2021
Historique:
received: 13 05 2020
accepted: 12 01 2021
entrez: 22 2 2021
pubmed: 23 2 2021
medline: 23 2 2021
Statut: epublish

Résumé

Early detection of mild cognitive impairment (MCI) has become a priority in Alzheimer's disease (AD) research, as it is a transitional phase between normal aging and dementia. However, information on MCI and AD is scattered across different formats and standards generated by different technologies, making it difficult to work with them manually. Ontologies have emerged as a solution to this problem due to their capacity for homogenization and consensus in the representation and reuse of data. In this context, an ontology that integrates the four main domains of neurodegenerative diseases, diagnostic tests, cognitive functions, and brain areas will be of great use in research. Here, we introduce the first approach to this ontology, the Neurocognitive Integrated Ontology (NIO), which integrates the knowledge regarding neuropsychological tests (NT), AD, cognitive functions, and brain areas. This ontology enables interoperability and facilitates access to data by integrating dispersed knowledge across different disciplines, rendering it useful for other research groups. To ensure the stability and reusability of NIO, the ontology was developed following the ontology-building life cycle, integrating and expanding terms from four different reference ontologies. The usefulness of this ontology was validated through use-case scenarios.

Identifiants

pubmed: 33613222
doi: 10.3389/fninf.2021.561691
pmc: PMC7889797
doi:

Types de publication

Journal Article

Langues

eng

Pagination

561691

Informations de copyright

Copyright © 2021 Gomez-Valades, Martinez-Tomas and Rincon.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Mayo Clin Proc. 2014 Oct;89(10):1452-9
pubmed: 25282431
Cortex. 2014 Jun;55:202-18
pubmed: 24556551
Alzheimers Dement. 2014 Mar;10(2):238-46
pubmed: 23830913
Stud Health Technol Inform. 2010;159:112-23
pubmed: 20543431
Neurology. 2008 Feb 12;70(7):512-20
pubmed: 17898323
Neuroinformatics. 2015 Jan;13(1):93-110
pubmed: 25240319
J Healthc Inf Manag. 2006 Winter;20(1):71-8
pubmed: 16429961
Front Psychiatry. 2019 Dec 13;10:878
pubmed: 31920741
Perspect Psychol Sci. 2010 Nov;5(6):767-71
pubmed: 24482667
Front Neuroinform. 2014 Jun 20;8:62
pubmed: 24999329
J Clin Exp Neuropsychol. 2020 Apr;42(3):319-328
pubmed: 31973657
J Alzheimers Dis. 2016 Apr 21;53(1):31-52
pubmed: 27104898
Comput Methods Programs Biomed. 2014 Mar;113(3):781-91
pubmed: 24468160
Nat Biotechnol. 2007 Nov;25(11):1251-5
pubmed: 17989687
Neuropsychol Dev Cogn B Aging Neuropsychol Cogn. 2020 Nov;27(6):826-840
pubmed: 31822214
Neuropsychologia. 2014 Feb;54:98-111
pubmed: 24384308
Dement Geriatr Cogn Disord. 2005;20(5):292-7
pubmed: 16166776
J Pers Med. 2020 Aug 14;10(3):
pubmed: 32823921
J Biomed Inform. 2006 Jun;39(3):314-20
pubmed: 16564748
Brief Bioinform. 2015 Nov;16(6):1069-80
pubmed: 25863278
Genome Biol. 2012 Jan 31;13(1):R5
pubmed: 22293552
Yearb Med Inform. 2008;:91-101
pubmed: 18660883
Brain Sci. 2017 Sep 01;7(9):
pubmed: 28862676
J Neuropsychol. 2016 Sep;10(2):239-55
pubmed: 25809316
Rev Neurol. 2015 Jun 16;60(12):553-61
pubmed: 26062828
Front Hum Neurosci. 2018 Jan 09;11:643
pubmed: 29375343
Proc AMIA Annu Fall Symp. 1997;:640-4
pubmed: 9357704
J Biomed Semantics. 2013 Dec 06;4(1):42
pubmed: 24314207
Front Aging Neurosci. 2017 Apr 11;9:101
pubmed: 28443019
J Biomed Inform. 2008 Oct;41(5):739-51
pubmed: 18583197
Drug Discov Today. 2014 Apr;19(4):433-40
pubmed: 24183925

Auteurs

Alba Gomez-Valades (A)

Department of Artificial Intelligence, Universidad Nacional de Educación a Distancia (UNED) Madrid, Spain.

Rafael Martinez-Tomas (R)

Department of Artificial Intelligence, Universidad Nacional de Educación a Distancia (UNED) Madrid, Spain.

Mariano Rincon (M)

Department of Artificial Intelligence, Universidad Nacional de Educación a Distancia (UNED) Madrid, Spain.

Classifications MeSH