Discovery and surveillance of viruses from salmon in British Columbia using viral immune-response biomarkers, metatranscriptomics, and high-throughput RT-PCR.
aquaculture
fisheries
in situ hybridisation
metatranscriptomics
viral ecology
virus discovery
Journal
Virus evolution
ISSN: 2057-1577
Titre abrégé: Virus Evol
Pays: England
ID NLM: 101664675
Informations de publication
Date de publication:
Jan 2021
Jan 2021
Historique:
entrez:
24
2
2021
pubmed:
25
2
2021
medline:
25
2
2021
Statut:
epublish
Résumé
The emergence of infectious agents poses a continual economic and environmental challenge to aquaculture production, yet the diversity, abundance, and epidemiology of aquatic viruses are poorly characterised. In this study, we applied salmon host transcriptional biomarkers to identify and select fish in a viral disease state, but only those that were negative for known viruses based on RT-PCR screening. These fish were selected for metatranscriptomic sequencing to discover potential viral pathogens of dead and dying farmed Atlantic (
Identifiants
pubmed: 33623707
doi: 10.1093/ve/veaa069
pii: veaa069
pmc: PMC7887441
doi:
Types de publication
Journal Article
Langues
eng
Pagination
veaa069Informations de copyright
© The Author(s) 2020. Published by Oxford University Press.
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