Temperature-Dependent Low-Frequency Vibrations of Thiamine Crystal Containing Hydrated Ions.


Journal

The journal of physical chemistry. A
ISSN: 1520-5215
Titre abrégé: J Phys Chem A
Pays: United States
ID NLM: 9890903

Informations de publication

Date de publication:
11 Mar 2021
Historique:
pubmed: 3 3 2021
medline: 3 3 2021
entrez: 2 3 2021
Statut: ppublish

Résumé

Low-frequency vibrations of crystalline molecules are very sensitive to the local environment in which the molecules, for example, hydrated ions captured in crystals, find themselves. We present low-temperature X-ray crystallographic measurements on the harvested thiamine crystal containing hydrated ions and its temperature-dependent terahertz spectra and synchrotron infrared microspectra. It is found from the X-ray structure that the hydrated ions and hydration water are in a similar environment to liquid, although those are captured in crystals. The vibrationally resolved THz spectra of two states in the present organic crystals containing hydrated ions are well explained by the difference in the hydrogen-bonded pattern. Peak assignments were performed based on highly accurate first-principles calculations incorporating relativistic effects and dispersion corrections. The temperature dependences are observed for the vibrations around the chloride ions and hydration water due to the loose binding of chloride ions, the bond elongation with increasing temperature, and the cleavage of weak hydrogen bonds.

Identifiants

pubmed: 33651615
doi: 10.1021/acs.jpca.0c09756
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1837-1844

Auteurs

Masae Takahashi (M)

Graduate School of Agricultural Science, Tohoku University, Sendai 980-8572, Japan.

Mitsuru Kowada (M)

Graduate School of Agricultural Science, Tohoku University, Sendai 980-8572, Japan.

Hiroshi Matsui (H)

Graduate School of Science, Tohoku University, Sendai 980-8578, Japan.

Eunsang Kwon (E)

Graduate School of Science, Tohoku University, Sendai 980-8578, Japan.

Yuka Ikemoto (Y)

Japan Synchrotron Radiation Research Institute JASRI SPring-8, Sayo, Hyogo 679-5198, Japan.

Classifications MeSH