Syntrophic Hydrocarbon Degradation in a Decommissioned Off-Shore Subsea Oil Storage Structure.
MAGs
alkanes
bioremediation
marine environments
metagenomics
microorganisms
oil systems
Journal
Microorganisms
ISSN: 2076-2607
Titre abrégé: Microorganisms
Pays: Switzerland
ID NLM: 101625893
Informations de publication
Date de publication:
11 Feb 2021
11 Feb 2021
Historique:
received:
22
01
2021
revised:
09
02
2021
accepted:
09
02
2021
entrez:
6
3
2021
pubmed:
7
3
2021
medline:
7
3
2021
Statut:
epublish
Résumé
Over the last decade, metagenomic studies have revealed the impact of oil production on the microbial ecology of petroleum reservoirs. However, despite their fundamental roles in bioremediation of hydrocarbons, biocorrosion, biofouling and hydrogen sulfide production, oil field and oil production infrastructure microbiomes are poorly explored. Understanding of microbial activities within oil production facilities is therefore crucial for environmental risk mitigation, most notably during decommissioning. The analysis of the planktonic microbial community from the aqueous phase of a subsea oil-storage structure was conducted. This concrete structure was part of the production platform of the Brent oil field (North Sea), which is currently undergoing decommissioning. Quantification and sequencing of microbial 16S rRNA genes, metagenomic analysis and reconstruction of metagenome assembled genomes (MAGs) revealed a unique microbiome, strongly dominated by organisms related to
Identifiants
pubmed: 33670234
pii: microorganisms9020356
doi: 10.3390/microorganisms9020356
pmc: PMC7916938
pii:
doi:
Types de publication
Journal Article
Langues
eng
Subventions
Organisme : Shell Global Solutions International
ID : -
Références
Int J Syst Evol Microbiol. 2006 Dec;56(Pt 12):2737-2742
pubmed: 17158970
Front Microbiol. 2016 Jan 07;6:1511
pubmed: 26779166
Bioinformatics. 2015 May 15;31(10):1674-6
pubmed: 25609793
Nature. 2015 Oct 22;526(7574):587-90
pubmed: 26490622
J Mol Microbiol Biotechnol. 2016;26(1-3):227-42
pubmed: 26959375
Adv Microb Physiol. 2011;59:1-100
pubmed: 22114840
ISME J. 2018 Aug;12(8):2096-2099
pubmed: 29805176
Sci Rep. 2017 Nov 22;7(1):16015
pubmed: 29167487
Appl Microbiol Biotechnol. 2012 May;94(4):851-73
pubmed: 22476263
Nat Methods. 2010 May;7(5):335-6
pubmed: 20383131
Nat Microbiol. 2019 Apr;4(4):603-613
pubmed: 30833729
Appl Microbiol Biotechnol. 2011 Oct;92(2):263-82
pubmed: 21858492
ISME J. 2013 May;7(5):885-95
pubmed: 23254512
Environ Microbiol. 2016 May;18(5):1403-14
pubmed: 26271760
Annu Rev Microbiol. 2012;66:429-52
pubmed: 22803797
Environ Microbiol. 2012 Jan;14(1):101-13
pubmed: 21651686
FEMS Microbiol Ecol. 2011 Jun;76(3):524-40
pubmed: 21348883
Nucleic Acids Res. 2014 Jan;42(Database issue):D459-71
pubmed: 24225315
Curr Opin Biotechnol. 2009 Dec;20(6):623-32
pubmed: 19897353
Appl Environ Microbiol. 2009 Dec;75(23):7537-41
pubmed: 19801464
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Curr Opin Biotechnol. 2014 Jun;27:21-9
pubmed: 24863893
Environ Microbiol. 2010 Aug;12(8):2327-40
pubmed: 21966923
Genome Biol. 2015 Mar 25;16:53
pubmed: 25885687
Nucleic Acids Res. 2007;35(21):7188-96
pubmed: 17947321
Biochim Biophys Acta. 2014 Dec;1837(12):2004-2016
pubmed: 24973598
Environ Sci Technol. 2010 Oct 1;44(19):7287-94
pubmed: 20504044
Appl Environ Microbiol. 1996 Mar;62(3):1099-101
pubmed: 16535261
Protein Sci. 2020 Apr;29(4):830-842
pubmed: 31721352
Proc Natl Acad Sci U S A. 2015 Mar 31;112(13):4015-20
pubmed: 25775520
Microbiome. 2017 Aug 23;5(1):106
pubmed: 28835260
Environ Microbiol. 2009 Jan;11(1):209-19
pubmed: 18811643
Bioinformatics. 2015 Jun 15;31(12):i35-43
pubmed: 26072503
Bioinformatics. 2012 Jun 1;28(11):1420-8
pubmed: 22495754
ISME J. 2017 Sep;11(9):2141-2154
pubmed: 28524866
ISME J. 2012 Sep;6(9):1715-27
pubmed: 22717885
ISME J. 2015 Aug;9(8):1710-22
pubmed: 25615435
Nat Commun. 2019 Apr 18;10(1):1816
pubmed: 31000700
Front Microbiol. 2016 Apr 22;7:562
pubmed: 27148240
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
ISME J. 2014 Oct;8(10):2029-44
pubmed: 24722631
Genome Res. 2015 Jul;25(7):1043-55
pubmed: 25977477
J Mol Microbiol Biotechnol. 2016;26(1-3):5-28
pubmed: 26960061
Microbiol Mol Biol Rev. 1997 Jun;61(2):262-80
pubmed: 9184013
Nucleic Acids Res. 2008 Jan;36(Database issue):D480-4
pubmed: 18077471
Bioinformatics. 2009 Sep 1;25(17):2271-8
pubmed: 19561336
Microorganisms. 2016 Jan 05;4(1):
pubmed: 27681901
Appl Environ Microbiol. 2016 Apr 04;82(8):2545-2554
pubmed: 26896143
Environ Microbiol. 2003 Sep;5(9):746-53
pubmed: 12919410
PeerJ. 2015 Aug 27;3:e1165
pubmed: 26336640