Comparative validation of multi-instance instrument segmentation in endoscopy: Results of the ROBUST-MIS 2019 challenge.

Minimally invasive surgery Multi-instance instrument Robustness and generalization Surgical data science

Journal

Medical image analysis
ISSN: 1361-8423
Titre abrégé: Med Image Anal
Pays: Netherlands
ID NLM: 9713490

Informations de publication

Date de publication:
05 2021
Historique:
received: 20 05 2020
revised: 22 09 2020
accepted: 24 11 2020
pubmed: 7 3 2021
medline: 24 6 2021
entrez: 6 3 2021
Statut: ppublish

Résumé

Intraoperative tracking of laparoscopic instruments is often a prerequisite for computer and robotic-assisted interventions. While numerous methods for detecting, segmenting and tracking of medical instruments based on endoscopic video images have been proposed in the literature, key limitations remain to be addressed: Firstly, robustness, that is, the reliable performance of state-of-the-art methods when run on challenging images (e.g. in the presence of blood, smoke or motion artifacts). Secondly, generalization; algorithms trained for a specific intervention in a specific hospital should generalize to other interventions or institutions. In an effort to promote solutions for these limitations, we organized the Robust Medical Instrument Segmentation (ROBUST-MIS) challenge as an international benchmarking competition with a specific focus on the robustness and generalization capabilities of algorithms. For the first time in the field of endoscopic image processing, our challenge included a task on binary segmentation and also addressed multi-instance detection and segmentation. The challenge was based on a surgical data set comprising 10,040 annotated images acquired from a total of 30 surgical procedures from three different types of surgery. The validation of the competing methods for the three tasks (binary segmentation, multi-instance detection and multi-instance segmentation) was performed in three different stages with an increasing domain gap between the training and the test data. The results confirm the initial hypothesis, namely that algorithm performance degrades with an increasing domain gap. While the average detection and segmentation quality of the best-performing algorithms is high, future research should concentrate on detection and segmentation of small, crossing, moving and transparent instrument(s) (parts).

Identifiants

pubmed: 33676097
pii: S1361-8415(20)30284-X
doi: 10.1016/j.media.2020.101920
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

101920

Informations de copyright

Copyright © 2020. Published by Elsevier B.V.

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Tobias Roß (T)

Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany; University of Heidelberg, Germany, Seminarstraße 2, 69117 Heidelberg, Germany. Electronic address: t.ross@dkfz-heidelberg.de.

Annika Reinke (A)

Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany; University of Heidelberg, Germany, Seminarstraße 2, 69117 Heidelberg, Germany.

Peter M Full (PM)

University of Heidelberg, Germany, Seminarstraße 2, 69117 Heidelberg, Germany; Division of Medical Image Computing (MIC), Im Neuenheimer Feld 223, 69120 Heidelberg, Germany.

Martin Wagner (M)

Department for General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 110, 69120 Heidelberg, Germany.

Hannes Kenngott (H)

Department for General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 110, 69120 Heidelberg, Germany.

Martin Apitz (M)

Department for General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 110, 69120 Heidelberg, Germany.

Hellena Hempe (H)

Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany.

Diana Mindroc-Filimon (D)

Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany.

Patrick Scholz (P)

Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany; HIDSS4Health - Helmholtz Information and Data Science School for Health, Im Neuenheimer Feld 223, 69120 Heidelberg, Germany.

Thuy Nuong Tran (TN)

Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany.

Pierangela Bruno (P)

Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany; Department of Mathematics and Computer Science, University of Calabria, 87036 Rende, Italy.

Pablo Arbeláez (P)

Universidad de los Andes, Cra. 1 No 18A - 12, 111711 Bogotá, Colombia.

Gui-Bin Bian (GB)

University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.

Sebastian Bodenstedt (S)

National Center for Tumor Diseases (NCT), Partner Site Dresden, Germany: German Cancer Research Center, Im Neuenheimer Feld 460, 69120 Heidelberg, Germany; Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, Germany; Helmholtz Association/Helmholtz-Zentrum Dresden - Rossendorf (HZDR), Bautzner Landstraße 400, 01328 Dresden, Germany.

Jon Lindström Bolmgren (JL)

caresyntax, Komturstraße 18A, 12099 Berlin, Germany.

Laura Bravo-Sánchez (L)

Universidad de los Andes, Cra. 1 No 18A - 12, 111711 Bogotá, Colombia.

Hua-Bin Chen (HB)

University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.

Cristina González (C)

Universidad de los Andes, Cra. 1 No 18A - 12, 111711 Bogotá, Colombia.

Dong Guo (D)

School of Mechanical and Electrical Engineering, University of Electronic Science and Technology of China, Shahe Campus:No.4, Section 2, North Jianshe Road, 610054 | Qingshuihe Campus:No.2006, Xiyuan Ave, West Hi-Tech Zone, 611731, Chengdu, China.

Pål Halvorsen (P)

SimulaMet, Pilestredet 52, 0167 Oslo, Norway; Oslo Metropolitan University (OsloMet), Pilestredet 52, 0167 Oslo, Norway.

Pheng-Ann Heng (PA)

Department of Computer Science and Engineering, The Chinese University of Hong Kong, Chung Chi Rd, Ma Liu Shui, Hong Kong, China.

Enes Hosgor (E)

caresyntax, Komturstraße 18A, 12099 Berlin, Germany.

Zeng-Guang Hou (ZG)

University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.

Fabian Isensee (F)

University of Heidelberg, Germany, Seminarstraße 2, 69117 Heidelberg, Germany; Division of Medical Image Computing (MIC), Im Neuenheimer Feld 223, 69120 Heidelberg, Germany.

Debesh Jha (D)

SimulaMet, Pilestredet 52, 0167 Oslo, Norway; Department of Informatics, UIT The Arctic University of Norway, Hansine Hansens vei 54, 9037 Tromsø, Norway.

Tingting Jiang (T)

Institute of Digital Media (NELVT), Peking University, 5 Yiheyuan Rd, Haidian District, 100871 Peking, China.

Yueming Jin (Y)

Department of Computer Science and Engineering, The Chinese University of Hong Kong, Chung Chi Rd, Ma Liu Shui, Hong Kong, China.

Kadir Kirtac (K)

caresyntax, Komturstraße 18A, 12099 Berlin, Germany.

Sabrina Kletz (S)

Institute of Information Technology, Klagenfurt University, Universitätsstraße 65-67, 9020 Klagenfurt, Austria.

Stefan Leger (S)

National Center for Tumor Diseases (NCT), Partner Site Dresden, Germany: German Cancer Research Center, Im Neuenheimer Feld 460, 69120 Heidelberg, Germany; Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, Germany; Helmholtz Association/Helmholtz-Zentrum Dresden - Rossendorf (HZDR), Bautzner Landstraße 400, 01328 Dresden, Germany.

Zhixuan Li (Z)

Institute of Digital Media (NELVT), Peking University, 5 Yiheyuan Rd, Haidian District, 100871 Peking, China.

Klaus H Maier-Hein (KH)

Division of Medical Image Computing (MIC), Im Neuenheimer Feld 223, 69120 Heidelberg, Germany.

Zhen-Liang Ni (ZL)

University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.

Michael A Riegler (MA)

SimulaMet, Pilestredet 52, 0167 Oslo, Norway.

Klaus Schoeffmann (K)

Institute of Information Technology, Klagenfurt University, Universitätsstraße 65-67, 9020 Klagenfurt, Austria.

Ruohua Shi (R)

Institute of Digital Media (NELVT), Peking University, 5 Yiheyuan Rd, Haidian District, 100871 Peking, China.

Stefanie Speidel (S)

National Center for Tumor Diseases (NCT), Partner Site Dresden, Germany: German Cancer Research Center, Im Neuenheimer Feld 460, 69120 Heidelberg, Germany; Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, Germany; Helmholtz Association/Helmholtz-Zentrum Dresden - Rossendorf (HZDR), Bautzner Landstraße 400, 01328 Dresden, Germany.

Michael Stenzel (M)

caresyntax, Komturstraße 18A, 12099 Berlin, Germany.

Isabell Twick (I)

caresyntax, Komturstraße 18A, 12099 Berlin, Germany.

Gutai Wang (G)

School of Mechanical and Electrical Engineering, University of Electronic Science and Technology of China, Shahe Campus:No.4, Section 2, North Jianshe Road, 610054 | Qingshuihe Campus:No.2006, Xiyuan Ave, West Hi-Tech Zone, 611731, Chengdu, China.

Jiacheng Wang (J)

Department of Computer Science, School of Informatics, Xiamen University, 422 Siming South Road, 361005 Xiamen, China.

Liansheng Wang (L)

Department of Computer Science, School of Informatics, Xiamen University, 422 Siming South Road, 361005 Xiamen, China.

Lu Wang (L)

School of Mechanical and Electrical Engineering, University of Electronic Science and Technology of China, Shahe Campus:No.4, Section 2, North Jianshe Road, 610054 | Qingshuihe Campus:No.2006, Xiyuan Ave, West Hi-Tech Zone, 611731, Chengdu, China.

Yujie Zhang (Y)

Department of Computer Science, School of Informatics, Xiamen University, 422 Siming South Road, 361005 Xiamen, China.

Yan-Jie Zhou (YJ)

University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.

Lei Zhu (L)

Department of Computer Science and Engineering, The Chinese University of Hong Kong, Chung Chi Rd, Ma Liu Shui, Hong Kong, China.

Manuel Wiesenfarth (M)

Division of Biostatistics, German Cancer Research Center, Im Neuenheimer Feld 581, Heidelberg, Germany.

Annette Kopp-Schneider (A)

Division of Biostatistics, German Cancer Research Center, Im Neuenheimer Feld 581, Heidelberg, Germany.

Beat P Müller-Stich (BP)

Department for General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 110, 69120 Heidelberg, Germany.

Lena Maier-Hein (L)

Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany.

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