Proximal Hyperspectral Imaging Detects Diurnal and Drought-Induced Changes in Maize Physiology.

automated phenotyping platform drought hyperspectral maize phenotyping physiology proximal sensing

Journal

Frontiers in plant science
ISSN: 1664-462X
Titre abrégé: Front Plant Sci
Pays: Switzerland
ID NLM: 101568200

Informations de publication

Date de publication:
2021
Historique:
received: 12 12 2020
accepted: 01 02 2021
entrez: 11 3 2021
pubmed: 12 3 2021
medline: 12 3 2021
Statut: epublish

Résumé

Hyperspectral imaging is a promising tool for non-destructive phenotyping of plant physiological traits, which has been transferred from remote to proximal sensing applications, and from manual laboratory setups to automated plant phenotyping platforms. Due to the higher resolution in proximal sensing, illumination variation and plant geometry result in increased non-biological variation in plant spectra that may mask subtle biological differences. Here, a better understanding of spectral measurements for proximal sensing and their application to study drought, developmental and diurnal responses was acquired in a drought case study of maize grown in a greenhouse phenotyping platform with a hyperspectral imaging setup. The use of brightness classification to reduce the illumination-induced non-biological variation is demonstrated, and allowed the detection of diurnal, developmental and early drought-induced changes in maize reflectance and physiology. Diurnal changes in transpiration rate and vapor pressure deficit were significantly correlated with red and red-edge reflectance. Drought-induced changes in effective quantum yield and water potential were accurately predicted using partial least squares regression and the newly developed Water Potential Index 2, respectively. The prediction accuracy of hyperspectral indices and partial least squares regression were similar, as long as a strong relationship between the physiological trait and reflectance was present. This demonstrates that current hyperspectral processing approaches can be used in automated plant phenotyping platforms to monitor physiological traits with a high temporal resolution.

Identifiants

pubmed: 33692820
doi: 10.3389/fpls.2021.640914
pmc: PMC7937976
doi:

Types de publication

Journal Article

Langues

eng

Pagination

640914

Informations de copyright

Copyright © 2021 Mertens, Verbraeken, Sprenger, Demuynck, Maleux, Cannoot, De Block, Maere, Nelissen, Bonaventure, Crafts-Brandner, Vogel, Bruce, Inzé and Wuyts.

Déclaration de conflit d'intérêts

GB was employed by company BASF Innovation Center Gent, Belgium. SC-B, JV, and WB were employed by BASF Corporation, USA. The remaining authors declare that this study received funding from BASF. The funder had the following involvement in the study: collaboratively conceived the original screening and research plans.

Références

Genetics. 2003 Dec;165(4):2117-28
pubmed: 14704191
Front Plant Sci. 2018 May 23;9:685
pubmed: 29875788
Funct Plant Biol. 2016 Feb;44(1):143-153
pubmed: 32480553
Plant Methods. 2015 Apr 17;11:29
pubmed: 25904970
Plant Cell. 2016 Oct;28(10):2417-2434
pubmed: 27729396
Plant Methods. 2018 Jun 8;14:45
pubmed: 29930695
Plant Physiol. 2017 Jan;173(1):614-626
pubmed: 28049858
Sensors (Basel). 2013 Feb 27;13(3):2830-47
pubmed: 23447014
Front Plant Sci. 2018 Aug 24;9:1182
pubmed: 30197650
J Exp Bot. 2011 May;62(9):3213-21
pubmed: 21339388
Front Plant Sci. 2017 Aug 03;8:1348
pubmed: 28824683
J Exp Bot. 2015 Apr;66(7):1817-32
pubmed: 25697789
Plant Cell Environ. 2012 Sep;35(9):1631-46
pubmed: 22471732
J Exp Bot. 2004 Jan;55(394):99-109
pubmed: 14645393
Photochem Photobiol. 2002 Mar;75(3):272-81
pubmed: 11950093
Spectrochim Acta A Mol Biomol Spectrosc. 2014 Jan 24;118:498-502
pubmed: 24080581
Front Plant Sci. 2019 Jun 03;10:730
pubmed: 31214235
Mol Plant. 2010 Jan;3(1):224-35
pubmed: 20026477
Front Plant Sci. 2018 Apr 09;9:468
pubmed: 29686693
New Phytol. 2006;169(3):623-35
pubmed: 16411964
J Exp Bot. 2011 Jun;62(10):3637-45
pubmed: 21414961
J Exp Bot. 2004 Jun;55(401):1423-31
pubmed: 15133055
IEEE Trans Syst Man Cybern B Cybern. 2004 Apr;34(2):898-911
pubmed: 15376838
Sci Rep. 2015 Nov 04;5:15919
pubmed: 26531782
MethodsX. 2019 Feb 26;6:399-408
pubmed: 30886829
Funct Plant Biol. 2015 Sep;42(9):858-864
pubmed: 32480728
Mol Plant. 2017 Jun 5;10(6):878-890
pubmed: 28461269
Funct Plant Biol. 2012 Nov;39(11):878-890
pubmed: 32480838
Plant Cell Physiol. 2009 Oct;50(10):1736-49
pubmed: 19667101
Nat Commun. 2014 Oct 08;5:5087
pubmed: 25295980
Plant Physiol. 2018 Jan;176(1):851-864
pubmed: 28986421
Front Plant Sci. 2016 Dec 27;7:1985
pubmed: 28083011
Am J Bot. 2001 Feb;88(2):278-84
pubmed: 11222250
Plant Methods. 2019 Jun 26;15:66
pubmed: 31391863

Auteurs

Stien Mertens (S)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Lennart Verbraeken (L)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Heike Sprenger (H)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Kirin Demuynck (K)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Katrien Maleux (K)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Bernard Cannoot (B)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Jolien De Block (J)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Steven Maere (S)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Hilde Nelissen (H)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Gustavo Bonaventure (G)

BASF SE, Ghent, Belgium.

Steven J Crafts-Brandner (SJ)

BASF Corporation, Research Triangle Park, NC, United States.

Jonathan T Vogel (JT)

BASF Corporation, Research Triangle Park, NC, United States.

Wesley Bruce (W)

BASF Corporation, Research Triangle Park, NC, United States.

Dirk Inzé (D)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Nathalie Wuyts (N)

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium.

Classifications MeSH