Terrestrial Inputs Shape Coastal Bacterial and Archaeal Communities in a High Arctic Fjord (Isfjorden, Svalbard).
Arctic
biogeochemical cycles
climate change
freshwater runoff
land-ocean connectivity
melt season
pelagic microbial communities
rivers and sediments
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2021
2021
Historique:
received:
06
10
2020
accepted:
29
01
2021
entrez:
15
3
2021
pubmed:
16
3
2021
medline:
16
3
2021
Statut:
epublish
Résumé
The Arctic is experiencing dramatic changes including increases in precipitation, glacial melt, and permafrost thaw, resulting in increasing freshwater runoff to coastal waters. During the melt season, terrestrial runoff delivers carbon- and nutrient-rich freshwater to Arctic coastal waters, with unknown consequences for the microbial communities that play a key role in determining the cycling and fate of terrestrial matter at the land-ocean interface. To determine the impacts of runoff on coastal microbial (bacteria and archaea) communities, we investigated changes in pelagic microbial community structure between the early (June) and late (August) melt season in 2018 in the Isfjorden system (Svalbard). Amplicon sequences of the 16S rRNA gene were generated from water column, river and sediment samples collected in Isfjorden along fjord transects from shallow river estuaries and glacier fronts to the outer fjord. Community shifts were investigated in relation to environmental gradients, and compared to river and marine sediment microbial communities. We identified strong temporal and spatial reorganizations in the structure and composition of microbial communities during the summer months in relation to environmental conditions. Microbial diversity patterns highlighted a reorganization from rich communities in June toward more even and less rich communities in August. In June, waters enriched in dissolved organic carbon (DOC) provided a niche for copiotrophic taxa including
Identifiants
pubmed: 33717004
doi: 10.3389/fmicb.2021.614634
pmc: PMC7952621
doi:
Types de publication
Journal Article
Langues
eng
Pagination
614634Informations de copyright
Copyright © 2021 Delpech, Vonnahme, McGovern, Gradinger, Præbel and Poste.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Références
ISME J. 2015 Jun;9(6):1410-22
pubmed: 25478683
Appl Environ Microbiol. 2006 Sep;72(9):5806-13
pubmed: 16957198
Nature. 2014 May 22;509(7501):479-82
pubmed: 24805239
Sci Rep. 2012;2:604
pubmed: 22930670
Front Microbiol. 2019 Feb 21;10:281
pubmed: 30846975
Microb Ecol. 2011 Oct;62(3):537-48
pubmed: 21556884
PLoS One. 2013 Jul 02;8(7):e67019
pubmed: 23843979
Bioinformatics. 2015 Sep 1;31(17):2882-4
pubmed: 25957349
Appl Environ Microbiol. 1997 Jan;63(1):63-70
pubmed: 8979340
ISME J. 2017 Apr;11(4):853-862
pubmed: 28072420
PeerJ. 2015 Dec 10;3:e1420
pubmed: 26713226
Front Microbiol. 2020 Jun 09;11:1242
pubmed: 32582131
Appl Environ Microbiol. 2014 Jun;80(12):3749-56
pubmed: 24727271
ISME J. 2015 Mar;9(3):563-80
pubmed: 25203836
Front Microbiol. 2016 Sep 21;7:1474
pubmed: 27708629
Proc Natl Acad Sci U S A. 2013 Aug 27;110(35):14168-73
pubmed: 23940354
Nat Rev Microbiol. 2009 Jun;7(6):451-9
pubmed: 19421189
PeerJ. 2018 May 4;6:e4705
pubmed: 29740514
Proc Natl Acad Sci U S A. 2008 Aug 12;105 Suppl 1:11512-9
pubmed: 18695234
ISME J. 2010 Sep;4(9):1087-90
pubmed: 20631804
Oecologia. 2001 Oct;129(2):271-280
pubmed: 28547606
Sci Total Environ. 2020 May 20;718:135264
pubmed: 31848061
ISME J. 2012 Aug;6(8):1621-4
pubmed: 22402401
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Nature. 2005 Sep 15;437(7057):349-55
pubmed: 16163345
J Microbiol Biotechnol. 2017 Dec 28;27(12):2089-2093
pubmed: 29032640
Science. 2020 May 15;368(6492):
pubmed: 32409447
Bioinformatics. 2012 Jul 15;28(14):1823-9
pubmed: 22556368
Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22427-32
pubmed: 20018741
Environ Microbiol. 2009 Dec;11(12):3132-9
pubmed: 19659500
Elife. 2019 Sep 03;8:
pubmed: 31478833
ISME J. 2019 Jun;13(6):1484-1496
pubmed: 30745572
Environ Microbiol. 2018 Aug;20(8):2709-2726
pubmed: 29521439
Microbes Environ. 2013;28(1):3-12
pubmed: 23124765
Appl Environ Microbiol. 2016 Jan 08;82(6):1868-1880
pubmed: 26746718
J Environ Biol. 2008 Jul;29(4):485-91
pubmed: 19195386
Sci Rep. 2019 Nov 14;9(1):16822
pubmed: 31727995
ISME J. 2010 Jun;4(6):784-98
pubmed: 20072162
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
Front Microbiol. 2012 Dec 19;3:417
pubmed: 23267351
ISME J. 2009 Oct;3(10):1148-63
pubmed: 19494846
Environ Microbiol. 2018 Aug;20(8):3100-3108
pubmed: 30109757
Nature. 2002 Dec 19-26;420(6917):806-10
pubmed: 12490947
ISME J. 2018 Jan;12(1):237-252
pubmed: 29064479
Ecology. 2008 Sep;89(9):2623-32
pubmed: 18831183
Science. 2008 May 23;320(5879):1034-9
pubmed: 18497287
Appl Environ Microbiol. 2011 Mar;77(6):2008-18
pubmed: 21257812
Science. 2015 Feb 13;347(6223):1257594
pubmed: 25678667
Front Microbiol. 2017 Jun 09;8:1018
pubmed: 28649233
Bioinformatics. 2014 Mar 1;30(5):614-20
pubmed: 24142950
Science. 2016 Sep 16;353(6305):1272-7
pubmed: 27634532
Front Microbiol. 2013 Mar 19;4:55
pubmed: 23515855
ISME J. 2019 Jan;13(1):170-182
pubmed: 30116043
Environ Sci Technol. 2003 Oct 15;37(20):4702-8
pubmed: 14594381
Environ Microbiol. 2009 Sep;11(9):2291-300
pubmed: 19490029
Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):9770-9778
pubmed: 28874558
ISME J. 2012 Feb;6(2):298-308
pubmed: 21850055
ISME J. 2013 Oct;7(10):1899-911
pubmed: 23719153
Sci Adv. 2020 Feb 12;6(7):eaax6869
pubmed: 32095521
Nat Rev Microbiol. 2019 Sep;17(9):569-586
pubmed: 31213707
FEMS Microbiol Ecol. 2018 Nov 1;94(11):
pubmed: 30137298
Mar Environ Res. 2020 Mar;155:104874
pubmed: 31975691
Science. 2012 May 4;336(6081):608-11
pubmed: 22556258
J Basic Microbiol. 2017 Oct;57(10):827-838
pubmed: 28752525
Front Microbiol. 2019 Nov 29;10:2628
pubmed: 31849850
Ecology. 2009 Dec;90(12):3566-74
pubmed: 20120823
Curr Opin Microbiol. 2015 Jun;25:33-9
pubmed: 25863027
J Microbiol Methods. 2017 Oct;141:10-16
pubmed: 28728909
ISME J. 2012 Aug;6(8):1499-505
pubmed: 22318305
Annu Rev Microbiol. 2003;57:369-94
pubmed: 14527284
ISME J. 2009 Mar;3(3):283-95
pubmed: 19052630