Comparative Genomics of Emerging Lineages and Mobile Resistomes of Contemporary Broiler Strains of
Escherichia coli
Salmonella Infantis
antibiotic resistance
core genome
plasmid
resistome
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2021
2021
Historique:
received:
15
12
2020
accepted:
03
02
2021
entrez:
15
3
2021
pubmed:
16
3
2021
medline:
16
3
2021
Statut:
epublish
Résumé
Commensal and pathogenic strains of multidrug-resistant (MDR) In order to understand possible genomic relations and to obtain a first insight into the potential interplay of resistance genes between enteric bacteria, we compared genomic diversity and mobile resistomes of The core genome MLST analysis of 56 This is the first comparative genomic analysis of contemporary broiler strains of
Identifiants
pubmed: 33717039
doi: 10.3389/fmicb.2021.642125
pmc: PMC7947892
doi:
Types de publication
Journal Article
Langues
eng
Pagination
642125Informations de copyright
Copyright © 2021 Szmolka, Wami and Dobrindt.
Déclaration de conflit d'intérêts
The authors declare that this study received funding from Pharma-Zentrale GmbH (Herdecke). The funder was not involved in the study design, collection, analysis, interpretation of data, the writing of the article, or the decision to submit it for publication.
Références
Microb Genom. 2020 May;6(5):
pubmed: 32271142
J Antimicrob Chemother. 2010 Dec;65(12):2518-29
pubmed: 20935300
Microbiol Mol Biol Rev. 2009 Dec;73(4):750-74
pubmed: 19946140
Int J Food Microbiol. 2012 Jun 15;157(1):108-12
pubmed: 22564450
Foodborne Pathog Dis. 2010 May;7(5):515-21
pubmed: 20039796
J Clin Microbiol. 2015 Aug;53(8):2410-26
pubmed: 25972421
Antimicrob Agents Chemother. 2012 Apr;56(4):2132-4
pubmed: 22290976
mBio. 2016 Sep 06;7(5):
pubmed: 27601577
BMC Vet Res. 2019 Dec 21;15(1):464
pubmed: 31864357
Pathog Glob Health. 2019 Sep;113(6):268-274
pubmed: 31757195
mSphere. 2018 Aug 15;3(4):
pubmed: 30111626
Vet Microbiol. 2018 Nov;225:72-78
pubmed: 30322537
J Food Sci. 2009 Sep;74(7):M405-10
pubmed: 19895488
J Microbiol Methods. 2005 Dec;63(3):219-28
pubmed: 15935499
Environ Microbiol. 2014 Apr;16(4):977-94
pubmed: 24320043
J Clin Microbiol. 2018 Mar 26;56(4):
pubmed: 29436416
Int J Med Microbiol. 2013 Aug;303(6-7):298-304
pubmed: 23499304
Front Microbiol. 2020 May 15;11:949
pubmed: 32499773
Anim Health Res Rev. 2008 Dec;9(2):149-58
pubmed: 19102788
BMC Genomics. 2019 Nov 15;20(1):870
pubmed: 31730461
Emerg Infect Dis. 2010 Nov;16(11):1754-7
pubmed: 21029536
J Clin Microbiol. 2015 May;53(5):1685-92
pubmed: 25762776
Front Microbiol. 2020 Jul 17;11:1741
pubmed: 32765483
J Antimicrob Chemother. 2006 Jul;58(1):18-22
pubmed: 16720566
Appl Environ Microbiol. 2019 Oct 30;85(22):
pubmed: 31471306
Front Microbiol. 2018 Aug 03;9:1756
pubmed: 30123199
Nat Biotechnol. 2013 Apr;31(4):294-6
pubmed: 23563421
Int J Antimicrob Agents. 2006 Oct;28(4):302-7
pubmed: 16949258
J Appl Microbiol. 2003;95(3):428-36
pubmed: 12911689
J Vet Med Sci. 2012 Sep;74(9):1213-6
pubmed: 22673563
mBio. 2015 Jan 13;6(1):
pubmed: 25587010
Antimicrob Agents Chemother. 2017 Jun 27;61(7):
pubmed: 28483962
J Antimicrob Chemother. 2012 Nov;67(11):2640-4
pubmed: 22782487
Infect Genet Evol. 2018 Nov;65:392-398
pubmed: 30157463
Access Microbiol. 2020 Jun 19;2(9):acmi000143
pubmed: 33195978
Front Microbiol. 2020 Apr 03;11:539
pubmed: 32318036
J Food Prot. 2016 Jul;79(7):1169-73
pubmed: 27357036
Adv Appl Microbiol. 2015;90:109-54
pubmed: 25596031
PLoS One. 2015 Dec 30;10(12):e0144802
pubmed: 26716443
Int J Food Microbiol. 2020 Apr 16;319:108497
pubmed: 31927155
J Antimicrob Chemother. 2017 Jun 1;72(6):1589-1596
pubmed: 28333184
Genome Res. 2020 Jan;30(1):138-152
pubmed: 31809257
Front Microbiol. 2013 Sep 03;4:258
pubmed: 24027562
BMC Genomics. 2017 Jan 3;18(1):13
pubmed: 28049430
J Clin Microbiol. 2012 May;50(5):1673-8
pubmed: 22378905
Appl Environ Microbiol. 1983 Jul;46(1):165-70
pubmed: 6351743
Appl Environ Microbiol. 1991 Aug;57(8):2429-32
pubmed: 1768116
Int J Food Microbiol. 2019 Oct 16;307:108275
pubmed: 31408739
PLoS One. 2019 Apr 5;14(4):e0207567
pubmed: 30951531
Curr Opin Microbiol. 2019 Oct;51:51-56
pubmed: 31325664
Antimicrob Agents Chemother. 2017 Apr 24;61(5):
pubmed: 28242671
J Antimicrob Chemother. 2004 Jun;53(6):1113-4
pubmed: 15150176
Front Microbiol. 2020 Oct 08;11:562181
pubmed: 33133037
Poult Sci. 2019 Apr 1;98(4):1791-1804
pubmed: 30544256
J Antimicrob Chemother. 2007 Sep;60(3):645-8
pubmed: 17617553
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
Antimicrob Agents Chemother. 2014 Jul;58(7):3895-903
pubmed: 24777092
J Clin Microbiol. 2007 Oct;45(10):3366-76
pubmed: 17652485
EFSA J. 2020 Mar 03;18(3):e06007
pubmed: 32874244
Lett Appl Microbiol. 2007 Oct;45(4):421-5
pubmed: 17897386
Antimicrob Agents Chemother. 2007 May;51(5):1872-5
pubmed: 17325216
PLoS Pathog. 2012;8(6):e1002776
pubmed: 22737074
Appl Environ Microbiol. 2005 Mar;71(3):1184-92
pubmed: 15746317
Acta Microbiol Immunol Hung. 2012 Sep;59(3):393-409
pubmed: 22982643
J Mol Evol. 1987;26(1-2):74-86
pubmed: 3125340
Front Microbiol. 2017 Jul 13;8:1322
pubmed: 28751886
Mol Microbiol. 2006 Jun;60(5):1136-51
pubmed: 16689791
FEMS Microbiol Rev. 2016 Jul 1;40(4):437-463
pubmed: 28201713
Int J Antimicrob Agents. 2016 Sep;48(3):345-6
pubmed: 27516228
Front Microbiol. 2018 Aug 17;9:1880
pubmed: 30174660
Food Microbiol. 2018 May;71:25-31
pubmed: 29366465
Front Microbiol. 2019 Aug 29;10:1994
pubmed: 31555232
Antimicrob Agents Chemother. 2005 Jun;49(6):2568-70
pubmed: 15917576
Front Microbiol. 2013 May 21;4:113
pubmed: 23734146
Genome Announc. 2015 Feb 12;3(1):
pubmed: 25676749