Proteomics Software in bio.tools: Coverage and Annotations.

ELIXIR annotation curation registry tools workflows

Journal

Journal of proteome research
ISSN: 1535-3907
Titre abrégé: J Proteome Res
Pays: United States
ID NLM: 101128775

Informations de publication

Date de publication:
02 04 2021
Historique:
pubmed: 16 3 2021
medline: 22 6 2021
entrez: 15 3 2021
Statut: ppublish

Résumé

The large diversity of experimental methods in proteomics as well as their increasing usage across biological and clinical research has led to the development of hundreds if not thousands of software tools to aid in the analysis and interpretation of the resulting data. Detailed information about these tools needs to be collected, categorized, and validated to guarantee their optimal utilization. A tools registry like bio.tools enables users and developers to identify new tools with more powerful algorithms or to find tools with similar functions for comparison. Here we present the content of the registry, which now comprises more than 1000 proteomics tool entries. Furthermore, we discuss future applications and engagement with other community efforts resulting in a high impact on the bioinformatics landscape.

Identifiants

pubmed: 33720718
doi: 10.1021/acs.jproteome.0c00978
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1821-1825

Auteurs

Veit Schwämmle (V)

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark.

Jennifer Harrow (J)

ELIXIR-Hub, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, United Kingdom.

Hans Ienasescu (H)

National Life Science Supercomputing Center, Technical University of Denmark, Building 208, DK-2800 Kongens Lyngby, Denmark.

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Classifications MeSH