Renormalization group theory of molecular dynamics.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
16 Mar 2021
Historique:
received: 17 07 2020
accepted: 26 02 2021
entrez: 17 3 2021
pubmed: 18 3 2021
medline: 18 3 2021
Statut: epublish

Résumé

Large scale computation by molecular dynamics (MD) method is often challenging or even impractical due to its computational cost, in spite of its wide applications in a variety of fields. Although the recent advancement in parallel computing and introduction of coarse-graining methods have enabled large scale calculations, macroscopic analyses are still not realizable. Here, we present renormalized molecular dynamics (RMD), a renormalization group of MD in thermal equilibrium derived by using the Migdal-Kadanoff approximation. The RMD method improves the computational efficiency drastically while retaining the advantage of MD. The computational efficiency is improved by a factor of [Formula: see text] over conventional MD where D is the spatial dimension and n is the number of applied renormalization transforms. We verify RMD by conducting two simulations; melting of an aluminum slab and collision of aluminum spheres. Both problems show that the expectation values of physical quantities are in good agreement after the renormalization, whereas the consumption time is reduced as expected. To observe behavior of RMD near the critical point, the critical exponent of the Lennard-Jones potential is extracted by calculating specific heat on the mesoscale. The critical exponent is obtained as [Formula: see text]. In addition, the renormalization group of dissipative particle dynamics (DPD) is derived. Renormalized DPD is equivalent to RMD in isothermal systems under the condition such that Deborah number [Formula: see text].

Identifiants

pubmed: 33727572
doi: 10.1038/s41598-021-85286-3
pii: 10.1038/s41598-021-85286-3
pmc: PMC7966406
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

5968

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Auteurs

Daiji Ichishima (D)

Technology Research Center, Sumitomo Heavy Industries, Ltd., 19 Natsushima-cho, Yokosuka-shi, Kanagawa, 237-8555, Japan. daiji.ichishima@shi-g.com.

Yuya Matsumura (Y)

Technology Research Center, Sumitomo Heavy Industries, Ltd., 19 Natsushima-cho, Yokosuka-shi, Kanagawa, 237-8555, Japan.

Classifications MeSH