LNDb challenge on automatic lung cancer patient management.


Journal

Medical image analysis
ISSN: 1361-8423
Titre abrégé: Med Image Anal
Pays: Netherlands
ID NLM: 9713490

Informations de publication

Date de publication:
05 2021
Historique:
received: 07 10 2020
revised: 18 01 2021
accepted: 26 02 2021
pubmed: 20 3 2021
medline: 24 6 2021
entrez: 19 3 2021
Statut: ppublish

Résumé

Lung cancer is the deadliest type of cancer worldwide and late detection is the major factor for the low survival rate of patients. Low dose computed tomography has been suggested as a potential screening tool but manual screening is costly and time-consuming. This has fuelled the development of automatic methods for the detection, segmentation and characterisation of pulmonary nodules. In spite of promising results, the application of automatic methods to clinical routine is not straightforward and only a limited number of studies have addressed the problem in a holistic way. With the goal of advancing the state of the art, the Lung Nodule Database (LNDb) Challenge on automatic lung cancer patient management was organized. The LNDb Challenge addressed lung nodule detection, segmentation and characterization as well as prediction of patient follow-up according to the 2017 Fleischner society pulmonary nodule guidelines. 294 CT scans were thus collected retrospectively at the Centro Hospitalar e Universitrio de So Joo in Porto, Portugal and each CT was annotated by at least one radiologist. Annotations comprised nodule centroids, segmentations and subjective characterization. 58 CTs and the corresponding annotations were withheld as a separate test set. A total of 947 users registered for the challenge and 11 successful submissions for at least one of the sub-challenges were received. For patient follow-up prediction, a maximum quadratic weighted Cohen's kappa of 0.580 was obtained. In terms of nodule detection, a sensitivity below 0.4 (and 0.7) at 1 false positive per scan was obtained for nodules identified by at least one (and two) radiologist(s). For nodule segmentation, a maximum Jaccard score of 0.567 was obtained, surpassing the interobserver variability. In terms of nodule texture characterization, a maximum quadratic weighted Cohen's kappa of 0.733 was obtained, with part solid nodules being particularly challenging to classify correctly. Detailed analysis of the proposed methods and the differences in performance allow to identify the major challenges remaining and future directions - data collection, augmentation/generation and evaluation of under-represented classes, the incorporation of scan-level information for better decision-making and the development of tools and challenges with clinical-oriented goals. The LNDb Challenge and associated data remain publicly available so that future methods can be tested and benchmarked, promoting the development of new algorithms in lung cancer medical image analysis and patient follow-up recommendation.

Identifiants

pubmed: 33740739
pii: S1361-8415(21)00073-6
doi: 10.1016/j.media.2021.102027
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

102027

Informations de copyright

Copyright © 2021 Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

João Pedrosa (J)

Institute for Systems and Computer Engineering, Technology and Science (INESC TEC), Porto, Portugal. Electronic address: joao.m.pedrosa@inesctec.pt.

Guilherme Aresta (G)

Institute for Systems and Computer Engineering, Technology and Science (INESC TEC), Porto, Portugal; Faculty of Engineering of the University of Porto (FEUP), Porto, Portugal.

Carlos Ferreira (C)

Institute for Systems and Computer Engineering, Technology and Science (INESC TEC), Porto, Portugal; Faculty of Engineering of the University of Porto (FEUP), Porto, Portugal.

Gurraj Atwal (G)

Department of Computer Science, California State University, Sacramento, USA.

Hady Ahmady Phoulady (HA)

Department of Computer Science, California State University, Sacramento, USA.

Xiaoyu Chen (X)

Department of Computer Science, School of Informatics, Xiamen University, China.

Rongzhen Chen (R)

Department of Computer Science, School of Informatics, Xiamen University, China.

Jiaoliang Li (J)

Department of Computer Science, School of Informatics, Xiamen University, China.

Liansheng Wang (L)

Department of Computer Science, School of Informatics, Xiamen University, China.

Adrian Galdran (A)

Department of Computing and Informatics, Bournemouth University, UK.

Hamid Bouchachia (H)

Department of Computing and Informatics, Bournemouth University, UK.

Krishna Chaitanya Kaluva (KC)

Predible Health, Bangalore, India.

Kiran Vaidhya (K)

Predible Health, Bangalore, India.

Abhijith Chunduru (A)

Predible Health, Bangalore, India.

Sambit Tarai (S)

Predible Health, Bangalore, India.

Sai Prasad Pranav Nadimpalli (SPP)

Predible Health, Bangalore, India.

Suthirth Vaidya (S)

Predible Health, Bangalore, India.

Ildoo Kim (I)

Kakao Brain, Seongnam-si, South Korea.

Alexandr Rassadin (A)

xperience.ai, Nizhny Novgorod, Russia.

Zhenhuan Tian (Z)

Department of Thoracic Surgery, Peking Union Medical College Hospital, Peking Union Medical College, Beijing, China.

Zhongwei Sun (Z)

Mediclouds Medical Technology, Beijing, China.

Yizhuan Jia (Y)

Mediclouds Medical Technology, Beijing, China.

Xuejun Men (X)

Mediclouds Medical Technology, Beijing, China.

Isabel Ramos (I)

Institute for Systems and Computer Engineering, Technology and Science (INESC TEC), Porto, Portugal; Department of Radiology, Centro Hospitalar e Universitário de S. João, Porto, Portugal.

António Cunha (A)

Institute for Systems and Computer Engineering, Technology and Science (INESC TEC), Porto, Portugal; University of Trás-os-Montes e Alto Douro (UTAD), Vila Real, Portugal.

Aurélio Campilho (A)

Institute for Systems and Computer Engineering, Technology and Science (INESC TEC), Porto, Portugal; Faculty of Engineering of the University of Porto (FEUP), Porto, Portugal.

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