Uncovering a novel function of the CCR4-NOT complex in phytochrome A-mediated light signalling in plants.


Journal

eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614

Informations de publication

Date de publication:
30 03 2021
Historique:
received: 02 10 2020
accepted: 03 02 2021
entrez: 30 3 2021
pubmed: 31 3 2021
medline: 4 9 2021
Statut: epublish

Résumé

Phytochromes are photoreceptors regulating growth and development in plants. Using the model plant Arabidopsis, we identified a novel signalling pathway downstream of the far-red light-sensing phytochrome, phyA, that depends on the highly conserved CCR4-NOT complex. CCR4-NOT is integral to RNA metabolism in yeast and animals, but its function in plants is largely unknown. NOT9B, an Arabidopsis homologue of human CNOT9, is a component of the CCR4-NOT complex, and acts as negative regulator of phyA-specific light signalling when bound to NOT1, the scaffold protein of the complex. Light-activated phyA interacts with and displaces NOT9B from NOT1, suggesting a potential mechanism for light signalling through CCR4-NOT. ARGONAUTE 1 and proteins involved in splicing associate with NOT9B and we show that NOT9B is required for specific phyA-dependent alternative splicing events. Furthermore, association with nuclear localised ARGONAUTE 1 raises the possibility that NOT9B and CCR4-NOT are involved in phyA-modulated gene expression. Place a seedling on a windowsill, and soon you will notice the fragile stem bending towards the glass to soak in the sun and optimize its growth. Plants can ‘sense’ light thanks to specialized photoreceptor molecules: for instance, the phytochrome A is responsible for detecting weak and ‘far-red’ light from the very edge of the visible spectrum. Once the phytochrome has been activated, this message is relayed to the rest of the plant through an intricate process that requires other molecules. The CCR4-NOT protein complex is vital for all plants, animals and fungi, suggesting that it was already present in early life forms. Here, Schwenk et al. examine whether CCR4-NOT could have acquired a new role in plants to help them respond to far-red light. Scanning the genetic information of the plant model

Autres résumés

Type: plain-language-summary (eng)
Place a seedling on a windowsill, and soon you will notice the fragile stem bending towards the glass to soak in the sun and optimize its growth. Plants can ‘sense’ light thanks to specialized photoreceptor molecules: for instance, the phytochrome A is responsible for detecting weak and ‘far-red’ light from the very edge of the visible spectrum. Once the phytochrome has been activated, this message is relayed to the rest of the plant through an intricate process that requires other molecules. The CCR4-NOT protein complex is vital for all plants, animals and fungi, suggesting that it was already present in early life forms. Here, Schwenk et al. examine whether CCR4-NOT could have acquired a new role in plants to help them respond to far-red light. Scanning the genetic information of the plant model

Identifiants

pubmed: 33783355
doi: 10.7554/eLife.63697
pii: 63697
pmc: PMC8009681
doi:
pii:

Substances chimiques

Arabidopsis Proteins 0
Phytochrome A 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Deutsche Forschungsgemeinschaft
ID : EXC-294
Organisme : Deutsche Forschungsgemeinschaft
ID : EXC-2189
Organisme : Deutsche Forschungsgemeinschaft
ID : GSC-4
Organisme : Deutsche Forschungsgemeinschaft
ID : HO 2793-3
Organisme : Deutsche Forschungsgemeinschaft
ID : HI 1369/10-1
Organisme : Hungarian Scientific Research Fund
ID : K-132633
Organisme : Economic Development and Innovation Operative Program
ID : GINOP-2.3.2-15-2016-00001
Organisme : Economic Development and Innovation Operative Program
ID : GINOP-2.3.2-15-2016-00015
Organisme : Economic Development and Innovation Operative Program
ID : GINOP-2.3.2-15-2016-00032
Organisme : Fonds National de la Recherche Luxembourg
ID : 14546015

Informations de copyright

© 2021, Schwenk et al.

Déclaration de conflit d'intérêts

PS, DS, JP, AS, KL, EL, KM, UH, EK, AV, AH No competing interests declared

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Auteurs

Philipp Schwenk (P)

Institute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany.
Spemann Graduate School of Biology and Medicine (SGBM), University of Freiburg, Freiburg, Germany.

David J Sheerin (DJ)

Institute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany.

Jathish Ponnu (J)

Institute for Plant Sciences and Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne, Germany.

Anne-Marie Staudt (AM)

Institute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany.

Klara L Lesch (KL)

Institute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany.
Spemann Graduate School of Biology and Medicine (SGBM), University of Freiburg, Freiburg, Germany.
Internal Medicine IV, Department of Medicine, Medical Center, University of Freiburg, Freiburg, Germany.

Elisabeth Lichtenberg (E)

Institute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany.

Katalin F Medzihradszky (KF)

Laboratory of Proteomics Research, Biological Research Centre, Szeged, Hungary.

Ute Hoecker (U)

Institute for Plant Sciences and Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne, Germany.

Eva Klement (E)

Laboratory of Proteomics Research, Biological Research Centre, Szeged, Hungary.

András Viczián (A)

Institute of Plant Biology, Biological Research Centre, Szeged, Hungary.

Andreas Hiltbrunner (A)

Institute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany.
Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.

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Classifications MeSH