Micro RNA-induced gene silencing strategy for the delivery of siRNAs targeting Meloidogyne incognita in a model plant Nicotiana benthamiana.

FMRFamide-like peptides Meloidogyne incognita host-induced gene silencing micro RNA-induced gene silencing parasitism transgenics

Journal

Pest management science
ISSN: 1526-4998
Titre abrégé: Pest Manag Sci
Pays: England
ID NLM: 100898744

Informations de publication

Date de publication:
Jul 2021
Historique:
revised: 23 03 2021
received: 19 11 2020
accepted: 31 03 2021
pubmed: 1 4 2021
medline: 16 6 2021
entrez: 31 3 2021
Statut: ppublish

Résumé

Occurrence of multiple biotic stresses on crop plants result in drastic yield losses which may have severe impact on the food security. It is a challenge to design strategies for simultaneous management of these multiple stresses. Hence, establishment of innovative approaches that aid in their management is critical. Here, we have introgressed a micro RNA-induced gene silencing (MIGS) based combinatorial gene construct containing seven target gene sequences of cotton leaf curl disease (CLCuD), cotton leaf hopper (Amrasca biguttula biguttula), cotton whitefly (Bemisia tabaci) and root-knot nematode (Meloidogyne incognita). Stable transgenic lines of Nicotiana benthamiana were generated with the T-DNA harboring Arabidopsis miR173 target site fused to fragments of Sec23 and ecdysone receptor (EcR) genes of cotton leaf hopper and cotton whitefly. It also contained C2/replication associated protein (C2/Rep) and C4 (movement protein) along with βC1 gene of betasatellite to target CLCuD, and two FMRFamide-like peptide (FLP) genes, Mi-flp14 and Mi-flp18 of M. incognita. These transgenic plants were assessed for the amenability of MIGS approach for pest control by efficacy evaluation against M. incognita. Results showed successful production of small interfering RNA (siRNA) through the tasiRNA (trans-acting siRNA) pathway in the transgenic plants corresponding to Mi-flp18 gene. Furthermore, we observed reduced Mi-flp14 and Mi-flp18 transcripts (up to 2.37 ± 0.12-fold) in females extracted from transgenic plants. The average number of galls, total endoparasites, egg masses and number of eggs per egg mass reduced were in the range 27-62%, 39-70%, 38-65% and 34-49%, respectively. More importantly, MIGS transgenic plants showed 80% reduction in the nematode multiplication factor (MF). This study demonstrates successful validation of the MIGS approach in the model plant, N. benthamiana for efficacy against M. incognita, as a prelude to translation to cotton. © 2021 Society of Chemical Industry.

Sections du résumé

BACKGROUND BACKGROUND
Occurrence of multiple biotic stresses on crop plants result in drastic yield losses which may have severe impact on the food security. It is a challenge to design strategies for simultaneous management of these multiple stresses. Hence, establishment of innovative approaches that aid in their management is critical. Here, we have introgressed a micro RNA-induced gene silencing (MIGS) based combinatorial gene construct containing seven target gene sequences of cotton leaf curl disease (CLCuD), cotton leaf hopper (Amrasca biguttula biguttula), cotton whitefly (Bemisia tabaci) and root-knot nematode (Meloidogyne incognita).
RESULTS RESULTS
Stable transgenic lines of Nicotiana benthamiana were generated with the T-DNA harboring Arabidopsis miR173 target site fused to fragments of Sec23 and ecdysone receptor (EcR) genes of cotton leaf hopper and cotton whitefly. It also contained C2/replication associated protein (C2/Rep) and C4 (movement protein) along with βC1 gene of betasatellite to target CLCuD, and two FMRFamide-like peptide (FLP) genes, Mi-flp14 and Mi-flp18 of M. incognita. These transgenic plants were assessed for the amenability of MIGS approach for pest control by efficacy evaluation against M. incognita. Results showed successful production of small interfering RNA (siRNA) through the tasiRNA (trans-acting siRNA) pathway in the transgenic plants corresponding to Mi-flp18 gene. Furthermore, we observed reduced Mi-flp14 and Mi-flp18 transcripts (up to 2.37 ± 0.12-fold) in females extracted from transgenic plants. The average number of galls, total endoparasites, egg masses and number of eggs per egg mass reduced were in the range 27-62%, 39-70%, 38-65% and 34-49%, respectively. More importantly, MIGS transgenic plants showed 80% reduction in the nematode multiplication factor (MF).
CONCLUSION CONCLUSIONS
This study demonstrates successful validation of the MIGS approach in the model plant, N. benthamiana for efficacy against M. incognita, as a prelude to translation to cotton. © 2021 Society of Chemical Industry.

Identifiants

pubmed: 33786977
doi: 10.1002/ps.6384
doi:

Substances chimiques

MicroRNAs 0
RNA, Small Interfering 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

3396-3405

Subventions

Organisme : Biotechnology Industry Research Assistance Council (BIRAC)
ID : BT/SBIRI-1238/SBIRI-24/14 BIPP

Informations de copyright

© 2021 Society of Chemical Industry.

Références

Zandalinas SI, Mittler R, Balfagón D, Arbona V and Gómez-Cadenas A, Plant adaptations to the combination of drought and high temperatures. Physiol Plantarum 162:2-12 (2018).
Savo V, Lepofsky D, Benner JP, Kohfeld KE, Bailey J and Lertzman K, Observations of climate change among subsistence-oriented communities around the world. Nat Clim Change 6:462-473 (2016).
Fire A, Xu S, Montgomery MK, Kostas SA, Driver SE and Mello CC, Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391:806-811 (1998).
McHale M, Eamens AL, Finnegan EJ and Waterhouse PM, A 22-nt artificial micro RNA mediates widespread RNA silencing in Arabidopsis. Plant J 76:519-529 (2013).
Fang X and Qi Y, RNAi in plants: an argonaute-centered view. Plant Cell 28:272-285 (2016).
Vogel E, Santos D, Mingels L, Verdonckt TW and Broeck JV, RNA interference in insects: protecting beneficials and controlling pests. Front Physiol 19:1912 (2019).
Chen X, Small RNAs and their roles in plant development. Annu Rev Cell Dev Biol 25:21-44 (2009).
de Felippes FF, Wang JW and Weigel D, MIGS: miRNA-induced gene silencing. Plant J 70:541-547 (2012).
Zhang ZJ, Artificial trans-acting small interfering RNA: a tool for plant biology study and crop improvements. Planta 239:1139-1146 (2014).
Zheng X, Yang L, Li Q, Ji L, Tang A, Zang L et al., MIGS as a simple and efficient method for gene silencing in rice. Front Plant Sci 9:662 (2018).
Carbonell A, Secondary small interfering RNA-based silencing tools in plants: an update. Front Plant Sci 10:687 (2019).
Papolu PK, Gantasala NP, Kamaraju D, Banakar P, Sreevathsa R and Rao U, Utility of host delivered RNAi of two FMRF amide like peptides, flp-14 and flp-18, for the management of root knot nematode, Meloidogyne incognita. PLoS One 8:e80603 (2013).
Kimber MJ, McKinney S, McMaster S, Day TA, Fleming CC and Maule AG, flp gene disruption in a parasitic nematode reveals motor dysfunction and unusual neuronal sensitivity to RNA interference. FASEB J 21:1233-1243 (2007).
Johnston MJG, McVeigh P, McMaster S, Fleming CC and Maule AG, FMRFamide-like peptides in root knot nematodes and their potential role in nematode physiology. J Helminthol 84:253-265 (2010).
Banakar P, Sharma A, Lilley CJ, Gantasala NP, Kumar M and Rao U, Combinatorial in vitro RNAi of two neuropeptide genes and a pharyngeal gland gene on Meloidogyne incognita. Nematology 17:155-167 (2015).
Horsch RB, Rogers SG and Fraley RT, Transgenic plants. Cold Spring Harb Symp Quant Biol 50:433-437 (1985).
Horsch RB, Fry J, Hoffmann N, Neidermeyer J, Rogers SG and Fraley RT, Leaf disc transformation, in Plant Molecular Biology Manual, ed. by Gelvin SB. Springer, Dordrecht, pp. 63-71 (1989).
Patil BL, Ogwok E, Wagaba H, Mohammed IU, Yadav JS, Bagewadi B et al., RNAi-mediated resistance to diverse isolates belonging to two virus species involved in Cassava brown streak disease. Mol Plant Pathol 12:31-41 (2011).
Sambrook J and Russell DW, Molecular Cloning: A Laboratory Manual, 3rd edn. Cold Spring Harbor Laboratory Press, New York (2001).
Gantasala NP, Papolu PK, Thakur PK, Kamaraju D, Sreevathsa R and Rao U, Selection and validation of reference genes for quantitative gene expression studies by real-time PCR in eggplant (Solanum melongena L). BMC Res Notes 6:1-1 (2013).
Dutta TK, Papolu PK, Banakar P, Choudhary D, Sirohi A and Rao U, Tomato transgenic plants expressing hairpin construct of a nematode protease gene conferred enhanced resistance to root-knot nematodes. Front Microbiol 6:260 (2015).
Papolu PK, Dutta TK, Tyagi N, Urwin PE, Lilley CJ and Rao U, Expression of a cystatin transgene in eggplant provides resistance to root-knot nematode, Meloidogyne incognita. Front Plant Sci 7:1122 (2016).
Papolu PK, Dutta TK, Hada A, Singh D and Rao U, The production of a synthetic chemodisruptive peptide in planta precludes Meloidogyne incognita multiplication in Solanum melongena. Physiol Mol Plant P 112:101542 (2020).
Shivakumara TN, Somvanshi VS, Phani V, Chaudhary S, Hada A, Budhwar R et al., Meloidogyne incognita (Nematoda: Meloidogynidae) sterol-binding protein Mi-SBP-1 as a target for its management. Int J Parasitol 49:1061-1073 (2019).
Whitehead AG and Hemming JR, A comparison of some quantitative methods of extracting small vermiform nematodes from soil. Ann Appl Biol 55:25-38 (1965).
Bybd DW Jr, Kirkpatrick T and Barker K, An improved technique for clearing and staining plant tissues for detection of nematodes. J Nematol 15:142 (1983).
Livak KJ and Schmittgen TD, Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method. Methods 25:402-408 (2001).
Sattar MN, Kvarnheden A, Saeed M and Briddon RW, Cotton leaf curl disease-an emerging threat to cotton production worldwide. J Gen Virol 94:695-710 (2013).
Pan X, Nichols RL, Li C and Zhang B, MicroRNA-target gene responses to root knot nematode (Meloidogyne incognita) infection in cotton (Gossypium hirsutum L.). Genomics 111:383-390 (2019).
Dhawan AK, Sidhu AS and Simwat GS, Assessment of avoidable loss in cotton (Gossypium hirsutum and G. arboreum) due to sucking pests and bollworms. Ind J Agric Sci 58:290-292 (1988).
Price DR and Gatehouse JA, RNAi-mediated crop protection against insects. Trends Biotechnol 26:393-400 (2008).
Huang GZ, Allen R, Davis EL, Baum TJ and Hussey RS, Engineering broad root-knot resistance in transgenic plants by RNAi silencing of a conserved and essential root-knot nematode parasitism gene. Proc Natl Acad Sci USA 103:14302-14306 (2006).
Wagaba H, Patil BL, Mukasa S, Alicai T, Fauquet CM and Taylor NJ, Artificial microRNA-derived resistance to cassava brown streak disease. J Virol Methods 231:38-43 (2016).
Piggott BJ, Liu J, Feng Z, Wescott SA and Xu XS, The neural circuits and synaptic mechanisms underlying motor initiation in C. elegans. Cell 147:922-933 (2011).
Peymen K, Watteyne J, Frooninckx L, Schoofs L and Beets I, The FMRFamide-like peptide family in nematodes. Front Endocrinol 5:90 (2014).
Warnock ND, Wilson L, Patten C, Fleming CC, Maule AG and Dalzell JJ, Nematode neuropeptides as transgenic nematicides. PLoS Pathog 13:e1006237 (2017).
Morris R, Wilson L, Sturrock M, Warnock ND, Carrizo D, Cox D et al., A neuropeptide modulates sensory perception in the entomopathogenic nematode Steinernema carpocapsae. PLoS Pathog 13:e1006185 (2017).
Moffett CL, Beckett AM, Mousley A, Geary TG, Marks NJ, Halton DW et al., The ovijector of Ascarissuum: multiple response types revealed by Caenorhabditis elegans FMRFamide-related peptides. Int J Parasitol 33:859-876 (2003).
Kumari C, Dutta TK, Chaudhary S, Banakar P, Papolu PK and Rao U, Molecular characterization of FMRFamide-like peptides in Meloidogyne graminicola and analysis of their knockdown effect on nematode infectivity. Gene 619:50-60 (2017).
Hada A, Kumari C, Phani V, Singh D, Chinnusamy V and Rao U, Host-induced silencing of FMRFamide-like peptide genes, flp-1 and flp-12, in rice impairs reproductive fitness of the root-knot nematode Meloidogyne graminicola. Front Plant Sci 11:894 (2020).
Urwin PE, McPherson MJ and Atkinson HJ, Enhanced transgenic plant resistance to nematodes by dual proteinase inhibitor constructs. Planta 204:472-479 (1998).
Banakar P, Hada A, Papolu PK and Rao U, Simultaneous RNAi knockdown of three FMRFamide-like peptide genes, Mi-flp1, Mi-flp12, and Mi-flp18 provides resistance to root-knot nematode, Meloidogyne incognita. Front Microbiol 11:2690 (2020).
de Souza Júnior JD, Coelho RR, Lourenço IT, da Rocha FR, Viana AA, de Macedo LL et al., Knocking-down Meloidogyne incognita proteases by plant-delivered dsRNA has negative pleiotropic effect on nematode vigor. PLoS One 8:e85364 (2013).

Auteurs

Alkesh Hada (A)

Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India.

Basavaprabhu L Patil (BL)

ICAR-National Institute for Plant Biotechnology, New Delhi, India.
Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India.

Akansha Bajpai (A)

ICAR-National Institute for Plant Biotechnology, New Delhi, India.

Karthik Kesiraju (K)

ICAR-National Institute for Plant Biotechnology, New Delhi, India.

Savithramma Dinesh-Kumar (S)

Department of Plant Biology and The Genome Center, College of Biological Sciences, University of California Davis, Davis, CA, USA.

Bheema Paraselli (B)

Chemveda Life Sciences, Hyderabad, India.

Rohini Sreevathsa (R)

ICAR-National Institute for Plant Biotechnology, New Delhi, India.

Uma Rao (U)

Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India.

Articles similaires

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male
Humans Meals Time Factors Female Adult

Classifications MeSH