Raman Spectral Signatures of Serum-Derived Extracellular Vesicle-Enriched Isolates May Support the Diagnosis of CNS Tumors.
CNS tumors
Raman spectroscopy
brain metastasis
glioblastoma multiforme
liquid biopsy
meningioma
small extracellular vesicles
Journal
Cancers
ISSN: 2072-6694
Titre abrégé: Cancers (Basel)
Pays: Switzerland
ID NLM: 101526829
Informations de publication
Date de publication:
19 Mar 2021
19 Mar 2021
Historique:
received:
22
01
2021
revised:
12
03
2021
accepted:
16
03
2021
entrez:
3
4
2021
pubmed:
4
4
2021
medline:
4
4
2021
Statut:
epublish
Résumé
Investigating the molecular composition of small extracellular vesicles (sEVs) for tumor diagnostic purposes is becoming increasingly popular, especially for diseases for which diagnosis is challenging, such as central nervous system (CNS) malignancies. Thorough examination of the molecular content of sEVs by Raman spectroscopy is a promising but hitherto barely explored approach for these tumor types. We attempt to reveal the potential role of serum-derived sEVs in diagnosing CNS tumors through Raman spectroscopic analyses using a relevant number of clinical samples. A total of 138 serum samples were obtained from four patient groups (glioblastoma multiforme, non-small-cell lung cancer brain metastasis, meningioma and lumbar disc herniation as control). After isolation, characterization and Raman spectroscopic assessment of sEVs, the Principal Component Analysis-Support Vector Machine (PCA-SVM) algorithm was performed on the Raman spectra for pairwise classifications. Classification accuracy (CA), sensitivity, specificity and the Area Under the Curve (AUC) value derived from Receiver Operating Characteristic (ROC) analyses were used to evaluate the performance of classification. The groups compared were distinguishable with 82.9-92.5% CA, 80-95% sensitivity and 80-90% specificity. AUC scores in the range of 0.82-0.9 suggest excellent and outstanding classification performance. Our results support that Raman spectroscopic analysis of sEV-enriched isolates from serum is a promising method that could be further developed in order to be applicable in the diagnosis of CNS tumors.
Identifiants
pubmed: 33808766
pii: cancers13061407
doi: 10.3390/cancers13061407
pmc: PMC8003579
pii:
doi:
Types de publication
Journal Article
Langues
eng
Références
PLoS One. 2018 Jan 17;13(1):e0191341
pubmed: 29342201
Science. 2014 Jun 20;344(6190):1396-401
pubmed: 24925914
Q J Nucl Med Mol Imaging. 2018 Sep;62(3):239-253
pubmed: 29696946
Annu Rev Cell Dev Biol. 2014;30:255-89
pubmed: 25288114
Photodiagnosis Photodyn Ther. 2019 Sep;27:156-161
pubmed: 31136828
PLoS One. 2019 Feb 14;14(2):e0212376
pubmed: 30763392
J Neurooncol. 2011 Aug;104(1):225-31
pubmed: 21104297
Ann Rheum Dis. 2020 Jun;79(6):e73
pubmed: 31005899
Cancers (Basel). 2019 Jul 05;11(7):
pubmed: 31284524
J Thorac Oncol. 2010 Sep;5(9):1315-6
pubmed: 20736804
Proc Natl Acad Sci U S A. 2015 May 12;112(19):E2497-506
pubmed: 25918398
Sci Rep. 2016 Aug 25;6:32067
pubmed: 27558167
Pharmaceuticals (Basel). 2020 Aug 04;13(8):
pubmed: 32759810
Proteomics Clin Appl. 2009 Jul 1;3(7):853-861
pubmed: 20559449
Anal Biochem. 2012 Sep 1;428(1):44-53
pubmed: 22691960
Arthritis Res Ther. 2018 Nov 6;20(1):251
pubmed: 30400975
Mol Cancer. 2019 Aug 13;18(1):124
pubmed: 31409361
Neurosurgery. 2016 Jun;78(6):N10-1
pubmed: 27191805
Head Neck Oncol. 2009 Sep 17;1:34
pubmed: 19761601
J Extracell Vesicles. 2020 Feb 19;9(1):1730134
pubmed: 32158522
Nanomedicine. 2019 Feb;16:88-96
pubmed: 30550805
Int J Mol Sci. 2020 Jul 28;21(15):
pubmed: 32731530
Proteomics. 2009 Nov;9(21):4997-5000
pubmed: 19810033
Cancers (Basel). 2019 Aug 23;11(9):
pubmed: 31450721
Sci Rep. 2019 Oct 25;9(1):15329
pubmed: 31653931
J Biomed Inform. 2007 Dec;40(6):661-71
pubmed: 17531544
Nat Rev Clin Oncol. 2019 Aug;16(8):509-520
pubmed: 30733593
Prostate. 2014 Oct;74(14):1379-90
pubmed: 25111183
J Extracell Vesicles. 2017 Nov 22;6(1):1400370
pubmed: 29209467
J Extracell Vesicles. 2015 Dec 31;4:30087
pubmed: 26725829
Nat Commun. 2018 Dec 19;9(1):5395
pubmed: 30568162
J Proteome Res. 2007 Dec;6(12):4549-55
pubmed: 17970587
Dose Response. 2019 Dec 9;17(4):1559325819891004
pubmed: 31839757
Nature. 2018 Aug;560(7718):382-386
pubmed: 30089911
Oncotarget. 2017 Jan 3;8(1):1416-1428
pubmed: 27902458
PLoS One. 2018 Mar 7;13(3):e0193799
pubmed: 29513714
Nature. 2015 Nov 19;527(7578):329-35
pubmed: 26524530
J Extracell Vesicles. 2015 Mar 13;4:26901
pubmed: 25773446
Lasers Med Sci. 2007 Nov;22(4):229-36
pubmed: 17297595
Cancer Cell. 2016 Aug 8;30(2):243-256
pubmed: 27505671
Proteomics. 2012 Aug;12(14):2378-90
pubmed: 22684992
Int J Mol Sci. 2018 Sep 21;19(10):
pubmed: 30248975
Expert Rev Mol Diagn. 2017 Oct;17(10):943-947
pubmed: 28875730
Neuro Oncol. 2018 Oct 1;20(suppl_4):iv1-iv86
pubmed: 30445539
Traffic. 2008 Jun;9(6):871-81
pubmed: 18331451
Acta Neuropathol. 2015 Jun;129(6):849-65
pubmed: 25720744
Anal Chem. 2017 Jun 20;89(12):6695-6701
pubmed: 28541032
Sci Rep. 2017 Aug 29;7(1):9820
pubmed: 28852131
J Proteome Res. 2005 Jul-Aug;4(4):1123-33
pubmed: 16083262
Oncoimmunology. 2017 Sep 27;7(1):e1376153
pubmed: 29296534
Mol Cell Proteomics. 2018 Oct;17(10):1948-1964
pubmed: 30006486
Sci Rep. 2020 Jan 23;10(1):1039
pubmed: 31974468
Proteomes. 2019 Apr 28;7(2):
pubmed: 31035355
Neurosurg Clin N Am. 2011 Jan;22(1):1-6, v
pubmed: 21109143
Clin Cancer Res. 2019 Jan 1;25(1):266-276
pubmed: 30287549
Semin Cell Dev Biol. 2020 Feb;98:54-62
pubmed: 31238096
PLoS One. 2016 Sep 23;11(9):e0163645
pubmed: 27661079
J Extracell Vesicles. 2015 May 14;4:27066
pubmed: 25979354
Int J Mol Sci. 2020 Jan 06;21(1):
pubmed: 31935918
Mol Aspects Med. 2018 Apr;60:15-26
pubmed: 29196097
Glia. 2016 Oct;64(10):1755-71
pubmed: 27228454
Chem Soc Rev. 2016 Apr 7;45(7):1958-79
pubmed: 26999370
Pharmgenomics Pers Med. 2014 Feb 13;7:65-77
pubmed: 24634586
Cell Adh Migr. 2017 Mar 4;11(2):127-134
pubmed: 27875097
J Extracell Vesicles. 2018 Nov 23;7(1):1535750
pubmed: 30637094
Analyst. 2018 Apr 16;143(8):1916-1923
pubmed: 29620771
Caspian J Intern Med. 2013 Spring;4(2):627-35
pubmed: 24009950
Clin Neurol Neurosurg. 2009 May;111(4):331-4
pubmed: 19117668
Nature. 2015 Jul 9;523(7559):177-82
pubmed: 26106858
Nat Biotechnol. 2016 Apr;34(4):359-60
pubmed: 27054974
Proteomics. 2019 Jan;19(1-2):e1800155
pubmed: 30467990
J Neurosurg. 2018 Aug;129(2):334-340
pubmed: 29053069
Neuro Oncol. 2018 Aug 2;20(9):1162-1172
pubmed: 29294069
Expert Rev Anticancer Ther. 2015 Jan;15(1):5-7
pubmed: 25525666
Oncotarget. 2016 May 10;7(19):28748-60
pubmed: 26919248
Nat Cell Biol. 2015 Jun;17(6):816-26
pubmed: 25985394