Machine Learning-Based Multiparametric Magnetic Resonance Imaging Radiomics for Prediction of H3K27M Mutation in Midline Gliomas.


Journal

World neurosurgery
ISSN: 1878-8769
Titre abrégé: World Neurosurg
Pays: United States
ID NLM: 101528275

Informations de publication

Date de publication:
07 2021
Historique:
received: 07 02 2021
revised: 24 03 2021
accepted: 25 03 2021
pubmed: 6 4 2021
medline: 14 9 2021
entrez: 5 4 2021
Statut: ppublish

Résumé

H3K27M mutation in gliomas has prognostic implications. Previous magnetic resonance imaging (MRI) studies have reported variable rates of tumoral enhancement, necrotic changes, and peritumoral edema in H3K27M-mutant gliomas, with no distinguishing imaging features compared with wild-type gliomas. We aimed to construct an MRI machine learning (ML)-based radiomic model to predict H3K27M mutation in midline gliomas. A total of 109 patients from 3 academic centers were included in this study. Fifty patients had H3K27M mutation and 59 were wild-type. Conventional MRI sequences (T1-weighted, T2-weighted, T2-fluid-attenuated inversion recovery, postcontrast T1-weighted, and apparent diffusion coefficient maps) were used for feature extraction. A total of 651 radiomic features per each sequence were extracted. Patients were randomly selected with a 7:3 ratio to create training (n = 76) and test (n = 33) data sets. An extreme gradient boosting algorithm (XGBoost) was used in ML-based model development. Performance of the model was assessed by area under the receiver operating characteristic curve. Pediatric patients accounted for a larger proportion of the study cohort (60 pediatric [55%] vs. 49 adult [45%] patients). XGBoost with additional feature selection had an area under the receiver operating characteristic curve of 0.791 and 0.737 in the training and test data sets, respectively. The model achieved accuracy, precision (positive predictive value), recall (sensitivity), and F1 (harmonic mean of precision and recall) measures of 72.7%, 76.5%, 72.2%, and 74.3%, respectively, in the test set. Our multi-institutional study suggests that ML-based radiomic analysis of multiparametric MRI can be a promising noninvasive technique to predict H3K27M mutation status in midline gliomas.

Identifiants

pubmed: 33819703
pii: S1878-8750(21)00506-4
doi: 10.1016/j.wneu.2021.03.135
pii:
doi:

Substances chimiques

Histones 0

Types de publication

Journal Article Multicenter Study

Langues

eng

Sous-ensembles de citation

IM

Pagination

e78-e85

Informations de copyright

Copyright © 2021 Elsevier Inc. All rights reserved.

Auteurs

Sedat Giray Kandemirli (SG)

Department of Radiology, University of Iowa Hospital and Clinics, Iowa City, Iowa, USA. Electronic address: sedat-kandemirli@uiowa.edu.

Burak Kocak (B)

Department of Radiology, Başakşehir Çam and Sakura City Hospital, Istanbul, Turkey.

Shotaro Naganawa (S)

Department of Radiology, University of Michigan, Ann Arbor, Michigan, USA.

Kerem Ozturk (K)

Department of Radiology, University of Minnesota, Minneapolis, Minnesota, USA.

Stephen S F Yip (SSF)

Department of Medical Physics, University of Wisconsin, Madison, Wisconsin, USA; AIQ Solutions, Madison, Wisconsin, USA.

Saurav Chopra (S)

Department of Pathology, University of Iowa Hospital and Clinics, Iowa City, Iowa, USA.

Luciano Rivetti (L)

FUESMEN and FADESA, Mendoza, Argentina.

Amro Saad Aldine (AS)

Department of Radiology, Louisiana State University Health Sciences Center, Louisiana, Missouri, USA.

Karra Jones (K)

Department of Pathology, University of Iowa Hospital and Clinics, Iowa City, Iowa, USA.

Zuzan Cayci (Z)

Department of Radiology, University of Minnesota, Minneapolis, Minnesota, USA.

Toshio Moritani (T)

Department of Radiology, University of Michigan, Ann Arbor, Michigan, USA.

Takashi Shawn Sato (TS)

Department of Radiology, University of Iowa Hospital and Clinics, Iowa City, Iowa, USA.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH