The XBI BioLab for life science experiments at the European XFEL.

European XFEL (EuXFEL) XBI Laboratory coherent diffractive imaging (CDI) free-electron lasers (XFELs) sample preparation and characterization serial femtosecond crystallography (SFX) single-particle imaging (SPI) structural biology time-resolved experiments

Journal

Journal of applied crystallography
ISSN: 0021-8898
Titre abrégé: J Appl Crystallogr
Pays: United States
ID NLM: 9876190

Informations de publication

Date de publication:
01 Feb 2021
Historique:
received: 25 08 2020
accepted: 19 10 2020
entrez: 9 4 2021
pubmed: 10 4 2021
medline: 10 4 2021
Statut: epublish

Résumé

The science of X-ray free-electron lasers (XFELs) critically depends on the performance of the X-ray laser and on the quality of the samples placed into the X-ray beam. The stability of biological samples is limited and key biomolecular transformations occur on short timescales. Experiments in biology require a support laboratory in the immediate vicinity of the beamlines. The XBI BioLab of the European XFEL (XBI denotes XFEL Biology Infrastructure) is an integrated user facility connected to the beamlines for supporting a wide range of biological experiments. The laboratory was financed and built by a collaboration between the European XFEL and the XBI User Consortium, whose members come from Finland, Germany, the Slovak Republic, Sweden and the USA, with observers from Denmark and the Russian Federation. Arranged around a central wet laboratory, the XBI BioLab provides facilities for sample preparation and scoring, laboratories for growing prokaryotic and eukaryotic cells, a Bio Safety Level 2 laboratory, sample purification and characterization facilities, a crystallization laboratory, an anaerobic laboratory, an aerosol laboratory, a vacuum laboratory for injector tests, and laboratories for optical microscopy, atomic force microscopy and electron microscopy. Here, an overview of the XBI facility is given and some of the results of the first user experiments are highlighted.

Identifiants

pubmed: 33833637
doi: 10.1107/S1600576720013989
pii: S1600576720013989
pmc: PMC7941304
doi:

Types de publication

Journal Article

Langues

eng

Pagination

7-21

Informations de copyright

© Huijong Han et al. 2021.

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Auteurs

Huijong Han (H)

European XFEL GmbH, Holzkoppel 4, 22869 Schenefeld, Germany.
Biocenter Oulu and Faculty of Biochemistry and Molecular Medicine, University of Oulu, Aapistie 7, 90220 Oulu, Finland.

Ekaterina Round (E)

European Molecular Biology Laboratory, Notkestrasse 85, 22607 Hamburg, Germany.

Robin Schubert (R)

European XFEL GmbH, Holzkoppel 4, 22869 Schenefeld, Germany.
Institute of Biochemistry and Molecular Biology, Laboratory for Structural Biology of Infection and Inflammation, University of Hamburg, c/o DESY, Building 22a, Notkestrasse 85, 22603 Hamburg, Germany.
The Hamburg Centre for Ultrafast Imaging (CUI), Luruper Chaussee 149, 22761 Hamburg, Germany.

Yasmin Gül (Y)

European Molecular Biology Laboratory, Notkestrasse 85, 22607 Hamburg, Germany.

Jana Makroczyová (J)

European XFEL GmbH, Holzkoppel 4, 22869 Schenefeld, Germany.
Institute of Molecular Biology, Slovak Academy of Sciences, Dúbravská cesta 21, 845 51 Bratislava, Slovak Republic.

Domingo Meza (D)

Biodesign Center for Applied Structural Discovery and School of Molecular Sciences, Arizona State University, Tempe, AZ, USA.

Philipp Heuser (P)

European Molecular Biology Laboratory, Notkestrasse 85, 22607 Hamburg, Germany.

Martin Aepfelbacher (M)

Institute of Medical Microbiology, Virology and Hygiene, University Medical Center Hamburg Eppendorf, Martinistrasse 52, 20246 Hamburg, Germany.

Imrich Barák (I)

Institute of Molecular Biology, Slovak Academy of Sciences, Dúbravská cesta 21, 845 51 Bratislava, Slovak Republic.

Christian Betzel (C)

Institute of Biochemistry and Molecular Biology, Laboratory for Structural Biology of Infection and Inflammation, University of Hamburg, c/o DESY, Building 22a, Notkestrasse 85, 22603 Hamburg, Germany.
The Hamburg Centre for Ultrafast Imaging (CUI), Luruper Chaussee 149, 22761 Hamburg, Germany.

Petra Fromme (P)

Biodesign Center for Applied Structural Discovery and School of Molecular Sciences, Arizona State University, Tempe, AZ, USA.

Inari Kursula (I)

Biocenter Oulu and Faculty of Biochemistry and Molecular Medicine, University of Oulu, Aapistie 7, 90220 Oulu, Finland.
Department of Biomedicine, University of Bergen, Jonas Lies vei 91, 5009 Bergen, Norway.

Poul Nissen (P)

DANDRITE, Nordic EMBL Partnership for Molecular Medicine, Aarhus University, Department of Molecular Biology and Genetics, Gustav Wieds Vej 10C, DK - 8000 Aarhus C, Denmark.

Elena Tereschenko (E)

Institute of Crystallography, Russian Academy of Sciences, 59 Leninsky prospekt, Moscow, 117333, Russian Federation.

Joachim Schulz (J)

European XFEL GmbH, Holzkoppel 4, 22869 Schenefeld, Germany.

Charlotte Uetrecht (C)

European XFEL GmbH, Holzkoppel 4, 22869 Schenefeld, Germany.
Heinrich Pette Institute, Leibniz Institute for Experimental Virology, Martinistrasse 52, 20251 Hamburg, Germany.

Jozef Ulicný (J)

Department of Biophysics, Institute of Physics, Faculty of Science, P. J. Šafárik University, Jesenná 5, 04154 Košice, Slovak Republic.

Matthias Wilmanns (M)

European Molecular Biology Laboratory, Notkestrasse 85, 22607 Hamburg, Germany.

Janos Hajdu (J)

The European Extreme Light Infrastructure, Institute of Physics, Academy of Sciences of the Czech Republic, Za Radnici 835, 25241 Dolní Břežany, Czech Republic.
Laboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, Husargatan 3 (Box 596), SE-751 24 Uppsala, Sweden.

Victor S Lamzin (VS)

European Molecular Biology Laboratory, Notkestrasse 85, 22607 Hamburg, Germany.

Kristina Lorenzen (K)

European XFEL GmbH, Holzkoppel 4, 22869 Schenefeld, Germany.

Classifications MeSH