Unsupervised random forests.

Impurity sidClustering staggered interaction data unsupervised learning

Journal

Statistical analysis and data mining
ISSN: 1932-1864
Titre abrégé: Stat Anal Data Min
Pays: United States
ID NLM: 101492808

Informations de publication

Date de publication:
Apr 2021
Historique:
entrez: 9 4 2021
pubmed: 10 4 2021
medline: 10 4 2021
Statut: ppublish

Résumé

sidClustering is a new random forests unsupervised machine learning algorithm. The first step in sidClustering involves what is called sidification of the features: staggering the features to have mutually exclusive ranges (called the staggered interaction data [SID] main features) and then forming all pairwise interactions (called the SID interaction features). Then a multivariate random forest (able to handle both continuous and categorical variables) is used to predict the SID main features. We establish uniqueness of sidification and show how multivariate impurity splitting is able to identify clusters. The proposed sidClustering method is adept at finding clusters arising from categorical and continuous variables and retains all the important advantages of random forests. The method is illustrated using simulated and real data as well as two in depth case studies, one from a large multi-institutional study of esophageal cancer, and the other involving hospital charges for cardiovascular patients.

Identifiants

pubmed: 33833846
doi: 10.1002/sam.11498
pmc: PMC8025042
mid: NIHMS1683277
doi:

Types de publication

Journal Article

Langues

eng

Pagination

144-167

Subventions

Organisme : NIGMS NIH HHS
ID : R01 GM125072
Pays : United States

Déclaration de conflit d'intérêts

CONFLICT OF INTEREST None declared.

Références

Dis Esophagus. 2016 Oct;29(7):707-714
pubmed: 27731549
Stat Anal Data Min. 2017 Dec;10(6):363-377
pubmed: 29403567
Stat Med. 2019 Feb 20;38(4):558-582
pubmed: 29869423

Auteurs

Alejandro Mantero (A)

Division of Biostatistics, University of Miami, Miami, Florida, USA.

Hemant Ishwaran (H)

Division of Biostatistics, University of Miami, Miami, Florida, USA.

Classifications MeSH