Addressing widespread misidentifications of traditional medicinal mushrooms in Sanghuangporus (Basidiomycota) through ITS barcoding and designation of reference sequences.

Hymenochaetaceae One new taxon Phylogeny Species boundary Taxonomy Wood-inhabiting fungi

Journal

IMA fungus
ISSN: 2210-6340
Titre abrégé: IMA Fungus
Pays: England
ID NLM: 101557546

Informations de publication

Date de publication:
15 Apr 2021
Historique:
received: 14 08 2020
accepted: 09 03 2021
entrez: 15 4 2021
pubmed: 16 4 2021
medline: 16 4 2021
Statut: epublish

Résumé

"Sanghuang" refers to a group of important traditionally-used medicinal mushrooms belonging to the genus Sanghuangporus. In practice, species of Sanghuangporus referred to in medicinal studies and industry are now differentiated mainly by a BLAST search of GenBank with the ITS barcoding region as a query. However, inappropriately labeled ITS sequences of "Sanghuang" in GenBank restrict accurate species identification and, to some extent, the utilization of these species as medicinal resources. We examined all available 271 ITS sequences related to "Sanghuang" in GenBank including 31 newly submitted sequences from this study. Of these sequences, more than half were mislabeled so we have now corrected the corresponding species names. The mislabeled sequences mainly came from strains utilized by non-taxonomists. Based on the analyses of ITS sequences submitted by taxonomists as well as morphological characters, we separate the newly described Sanghuangporus subbaumii from S. baumii and treat S. toxicodendri as a later synonym of S. quercicola. Fourteen species of Sanghuangporus are accepted, with intraspecific distances up to 1.30% (except in S. vaninii, S. weirianus and S. zonatus) and interspecific distances above 1.30% (except between S. alpinus and S. lonicerinus, and S. baumii and S. subbaumii). To stabilize the concept of these 14 species of Sanghuangporus, their taxonomic information and reliable ITS reference sequences are provided. Moreover, ten potential diagnostic sequences are provided for Hyperbranched Rolling Circle Amplification to rapidly confirm three common commercial species, viz. S. baumii, S. sanghuang, and S. vaninii. Our results provide a practical method for ITS barcoding-based species identification of Sanghuangporus and will promote medicinal studies and commercial development from taxonomically correct material.

Identifiants

pubmed: 33853671
doi: 10.1186/s43008-021-00059-x
pii: 10.1186/s43008-021-00059-x
pmc: PMC8048060
doi:

Types de publication

Journal Article

Langues

eng

Pagination

10

Subventions

Organisme : National Natural Science Foundation of China
ID : 31970012
Organisme : Youth Innovation Promotion Association of the Chinese Academy of Sciences
ID : 2017240
Organisme : Biological Resources Programme, Chinese Academy of Sciences
ID : KFJ-BRP-017-12

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Auteurs

Shan Shen (S)

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
University of Chinese Academy of Sciences, Beijing, 100049, China.

Shi-Liang Liu (SL)

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

Ji-Hang Jiang (JH)

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

Li-Wei Zhou (LW)

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China. liwei_zhou1982@im.ac.cn.
Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, 110016, China. liwei_zhou1982@im.ac.cn.

Classifications MeSH