U-Sleep: resilient high-frequency sleep staging.


Journal

NPJ digital medicine
ISSN: 2398-6352
Titre abrégé: NPJ Digit Med
Pays: England
ID NLM: 101731738

Informations de publication

Date de publication:
15 Apr 2021
Historique:
received: 22 12 2020
accepted: 10 03 2021
entrez: 16 4 2021
pubmed: 17 4 2021
medline: 17 4 2021
Statut: epublish

Résumé

Sleep disorders affect a large portion of the global population and are strong predictors of morbidity and all-cause mortality. Sleep staging segments a period of sleep into a sequence of phases providing the basis for most clinical decisions in sleep medicine. Manual sleep staging is difficult and time-consuming as experts must evaluate hours of polysomnography (PSG) recordings with electroencephalography (EEG) and electrooculography (EOG) data for each patient. Here, we present U-Sleep, a publicly available, ready-to-use deep-learning-based system for automated sleep staging ( sleep.ai.ku.dk ). U-Sleep is a fully convolutional neural network, which was trained and evaluated on PSG recordings from 15,660 participants of 16 clinical studies. It provides accurate segmentations across a wide range of patient cohorts and PSG protocols not considered when building the system. U-Sleep works for arbitrary combinations of typical EEG and EOG channels, and its special deep learning architecture can label sleep stages at shorter intervals than the typical 30 s periods used during training. We show that these labels can provide additional diagnostic information and lead to new ways of analyzing sleep. U-Sleep performs on par with state-of-the-art automatic sleep staging systems on multiple clinical datasets, even if the other systems were built specifically for the particular data. A comparison with consensus-scores from a previously unseen clinic shows that U-Sleep performs as accurately as the best of the human experts. U-Sleep can support the sleep staging workflow of medical experts, which decreases healthcare costs, and can provide highly accurate segmentations when human expertize is lacking.

Identifiants

pubmed: 33859353
doi: 10.1038/s41746-021-00440-5
pii: 10.1038/s41746-021-00440-5
pmc: PMC8050216
doi:

Types de publication

Journal Article

Langues

eng

Pagination

72

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Auteurs

Mathias Perslev (M)

Department of Computer Science, University of Copenhagen, Copenhagen, Denmark.

Sune Darkner (S)

Department of Computer Science, University of Copenhagen, Copenhagen, Denmark.

Lykke Kempfner (L)

Danish Center for Sleep Medicine, Rigshospitalet, Copenhagen, Denmark.

Miki Nikolic (M)

Danish Center for Sleep Medicine, Rigshospitalet, Copenhagen, Denmark.

Poul Jørgen Jennum (PJ)

Danish Center for Sleep Medicine, Rigshospitalet, Copenhagen, Denmark.

Christian Igel (C)

Department of Computer Science, University of Copenhagen, Copenhagen, Denmark. igel@diku.dk.

Classifications MeSH