Parsing Sage and Rosemary in Time: The Machine Learning Race to Crack Olfactory Perception.


Journal

Chemical senses
ISSN: 1464-3553
Titre abrégé: Chem Senses
Pays: England
ID NLM: 8217190

Informations de publication

Date de publication:
01 01 2021
Historique:
pubmed: 17 4 2021
medline: 27 8 2021
entrez: 16 4 2021
Statut: ppublish

Résumé

Color and pitch perception are largely understandable from characteristics of physical stimuli: the wavelengths of light and sound waves, respectively. By contrast, understanding olfactory percepts from odorous stimuli (volatile molecules) is much more challenging. No intuitive set of molecular features is up to the task. Here in Chemical Senses, the Ray lab reports using a predictive modeling framework-first breaking molecular structure into thousands of features and then using this to train a predictive statistical model on a wide range of perceptual descriptors-to create a tool for predicting the odor character of hundreds of thousands of available but previously uncharacterized molecules (Kowalewski et al. 2021). This will allow future investigators to representatively sample the space of odorous molecules as well as identify previously unknown odorants with a target odor character. Here, I put this work into the context of other modeling efforts and highlight the urgent need for large new datasets and transparent benchmarks for the field to make and evaluate modeling breakthroughs, respectively.

Identifiants

pubmed: 33860304
pii: 6226923
doi: 10.1093/chemse/bjab020
pmc: PMC8130506
pii:
doi:

Substances chimiques

Volatile Organic Compounds 0

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NIDCD NIH HHS
ID : R01 DC018455
Pays : United States
Organisme : NIDCD NIH HHS
ID : U01 DC019573
Pays : United States
Organisme : NINDS NIH HHS
ID : U19 NS112953
Pays : United States
Organisme : NIDCD NIH HHS
ID : R01 DC017757
Pays : United States

Informations de copyright

© The Author(s) 2021. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Références

Physiol Behav. 1996 Jul;60(1):211-5
pubmed: 8804666
Nature. 1963 Aug 31;199:912-3
pubmed: 14079907
Nature. 1999 Oct 21;401(6755):788-91
pubmed: 10548103
PLoS One. 2013 Sep 18;8(9):e73289
pubmed: 24058466
BMC Neurosci. 2016 Aug 08;17(1):55
pubmed: 27502425
Cell. 1991 Apr 5;65(1):175-87
pubmed: 1840504
Elife. 2015 Jul 07;4:e08127
pubmed: 26151673
Science. 1982 Nov 19;218(4574):799-801
pubmed: 7134974
Chem Senses. 2021 Jan 1;46:
pubmed: 33640959
Science. 2017 Feb 24;355(6327):820-826
pubmed: 28219971
Experientia. 1986 Mar 15;42(3):271-9
pubmed: 3514264
Chem Senses. 2006 Oct;31(8):713-24
pubmed: 16855062
Physiol Rev. 1998 Apr;78(2):429-66
pubmed: 9562035
Neuron. 2020 Nov 11;108(3):413-423
pubmed: 32918861
Chem Senses. 2019 Jan 1;44(1):11-22
pubmed: 30371751
Nat Commun. 2018 Nov 26;9(1):4979
pubmed: 30478272
Science. 2000 Dec 22;290(5500):2319-23
pubmed: 11125149
Nat Rev Drug Discov. 2017 Jan;16(1):19-34
pubmed: 27910877
J Neurosci. 2007 Sep 12;27(37):10015-23
pubmed: 17855616
Proc Natl Acad Sci U S A. 2012 Dec 4;109(49):19959-64
pubmed: 23169632
Front Syst Neurosci. 2011 Sep 15;5:65
pubmed: 21954378
Nature. 1971 Sep 24;233(5317):270-1
pubmed: 4938369
Science. 2014 Mar 21;343(6177):1370-2
pubmed: 24653035
Nat Rev Drug Discov. 2013 Jan;12(1):25-34
pubmed: 23237917
Nature. 2020 Dec;588(7836):118-123
pubmed: 33177711
Mol Pharmacol. 2015 Sep;88(3):579-88
pubmed: 26134495
iScience. 2020 Aug 21;23(8):101361
pubmed: 32731170
Behav Neurosci. 2006 Dec;120(6):1337-45
pubmed: 17201479
PLoS Comput Biol. 2013;9(9):e1003184
pubmed: 24068899
J Med Chem. 2014 Jun 26;57(12):4977-5010
pubmed: 24351051
Chem Senses. 1996 Dec;21(6):773-91
pubmed: 8985605
Ann N Y Acad Sci. 1964 Jul 30;116:457-76
pubmed: 14220538

Auteurs

Richard C Gerkin (RC)

School of Life Sciences, Arizona State University, 427 East Tyler Mall, Tempe, AZ 85287, USA.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH