Time-dependent knotting of agitated chains.


Journal

Physical review. E
ISSN: 2470-0053
Titre abrégé: Phys Rev E
Pays: United States
ID NLM: 101676019

Informations de publication

Date de publication:
Mar 2021
Historique:
received: 01 12 2020
accepted: 19 02 2021
entrez: 17 4 2021
pubmed: 18 4 2021
medline: 18 4 2021
Statut: ppublish

Résumé

Agitated strings serve as macroscale models of spontaneous knotting, providing valuable insight into knotting dynamics at the microscale while allowing explicit analysis of the resulting knot topologies. We present an experimental setup for confined macroscale knot formation via tumbling along with a software interface to process complex knot data. Our setup allows characterization of knotting probability, knot complexity, and knot formation dynamics for knots with as many as 50 crossings. We find that the probability of knotting saturates below 80% within 100 s of the initiation of tumbling and that this saturation probability does not increase for chains above a critical length, an indication of nonequilibrium knot-formation conditions in our experiment. Despite the saturation in knot formation, we show that longer chains, while being more confined, will always tend to form knots of higher complexity since the free end can access a greater number of loops during tumbling.

Identifiants

pubmed: 33862677
doi: 10.1103/PhysRevE.103.032501
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

032501

Auteurs

Ingrid Gendron (I)

Physics Department, McGill University, 3600 rue University, Montreal, Canada.

Katherine Savard (K)

Physics Department, McGill University, 3600 rue University, Montreal, Canada.

Xavier Capaldi (X)

Physics Department, McGill University, 3600 rue University, Montreal, Canada.

Zezhou Liu (Z)

Physics Department, McGill University, 3600 rue University, Montreal, Canada.

Lili Zeng (L)

Physics Department, McGill University, 3600 rue University, Montreal, Canada.

Walter Reisner (W)

Physics Department, McGill University, 3600 rue University, Montreal, Canada.

Luc Capaldi (L)

Department of Mechanical Engineering, University of Vermont, Burlington, Vermont 05405, USA.

Classifications MeSH