Genome-wide analysis of 944 133 individuals provides insights into the etiology of haemorrhoidal disease.

anal canal histopathology anorectal disorders genetics

Journal

Gut
ISSN: 1468-3288
Titre abrégé: Gut
Pays: England
ID NLM: 2985108R

Informations de publication

Date de publication:
22 Apr 2021
Historique:
received: 18 12 2020
revised: 19 03 2021
accepted: 30 03 2021
entrez: 23 4 2021
pubmed: 24 4 2021
medline: 24 4 2021
Statut: aheadofprint

Résumé

Haemorrhoidal disease (HEM) affects a large and silently suffering fraction of the population but its aetiology, including suspected genetic predisposition, is poorly understood. We report the first genome-wide association study (GWAS) meta-analysis to identify genetic risk factors for HEM to date. We conducted a GWAS meta-analysis of 218 920 patients with HEM and 725 213 controls of European ancestry. Using GWAS summary statistics, we performed multiple genetic correlation analyses between HEM and other traits as well as calculated HEM polygenic risk scores (PRS) and evaluated their translational potential in independent datasets. Using functional annotation of GWAS results, we identified HEM candidate genes, which differential expression and coexpression in HEM tissues were evaluated employing RNA-seq analyses. The localisation of expressed proteins at selected loci was investigated by immunohistochemistry. We demonstrate modest heritability and genetic correlation of HEM with several other diseases from the GI, neuroaffective and cardiovascular domains. HEM PRS validated in 180 435 individuals from independent datasets allowed the identification of those at risk and correlated with younger age of onset and recurrent surgery. We identified 102 independent HEM risk loci harbouring genes whose expression is enriched in blood vessels and GI tissues, and in pathways associated with smooth muscles, epithelial and endothelial development and morphogenesis. Network transcriptomic analyses highlighted HEM gene coexpression modules that are relevant to the development and integrity of the musculoskeletal and epidermal systems, and the organisation of the extracellular matrix. HEM has a genetic component that predisposes to smooth muscle, epithelial and connective tissue dysfunction.

Identifiants

pubmed: 33888516
pii: gutjnl-2020-323868
doi: 10.1136/gutjnl-2020-323868
pmc: PMC8292596
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NIDDK NIH HHS
ID : R01 DK057061
Pays : United States

Informations de copyright

© Author(s) (or their employer(s)) 2021. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.

Déclaration de conflit d'intérêts

Competing interests: Vladimir Vacic and Olga V. Sazonova are/were employed by and hold stock or stock options in 23andMe, Inc. All other authors have nothing to declare.

Références

PLoS One. 2011;6(8):e23473
pubmed: 21858135
Nat Genet. 2006 Mar;38(3):343-9
pubmed: 16444274
Gigascience. 2019 Jul 1;8(7):
pubmed: 31307061
J Invest Dermatol. 2013 Nov;133(11):2628-2631
pubmed: 23633020
Clin Gastroenterol Hepatol. 2019 Jan;17(1):8-15
pubmed: 29601902
Tech Coloproctol. 2015 Feb;19(2):83-7
pubmed: 25381456
BMJ Open. 2019 Jun 9;9(6):e028401
pubmed: 31182452
Ann Gastroenterol. 2019 May-Jun;32(3):264-272
pubmed: 31040623
Nature. 2018 Oct;562(7726):203-209
pubmed: 30305743
BMC Bioinformatics. 2008 Dec 29;9:559
pubmed: 19114008
PLoS Genet. 2018 Sep 27;14(9):e1007601
pubmed: 30261039
Am J Hum Genet. 2018 Jun 7;102(6):1048-1061
pubmed: 29779563
Bioinformatics. 2016 May 15;32(10):1493-501
pubmed: 26773131
Int J Epidemiol. 2015 Aug;44(4):1137-47
pubmed: 24518929
Int J Epidemiol. 2013 Aug;42(4):968-77
pubmed: 22879362
Dis Colon Rectum. 1983 Jul;26(7):435-9
pubmed: 6861574
Genetics. 2015 Aug;200(4):1051-60
pubmed: 26092718
J Biol Chem. 2014 May 16;289(20):14075-88
pubmed: 24711452
Arterioscler Thromb Vasc Biol. 2020 Mar;40(3):830-838
pubmed: 31969017
Am J Physiol Gastrointest Liver Physiol. 2017 Mar 1;312(3):G228-G245
pubmed: 27979828
PLoS Comput Biol. 2015 Apr 17;11(4):e1004219
pubmed: 25885710
Semin Thromb Hemost. 2016 Mar;42(2):112-7
pubmed: 26716497
Pediatr Surg Int. 2005 Apr;21(4):255-63
pubmed: 15759143
Bioinformatics. 2019 Nov 1;35(22):4851-4853
pubmed: 31233103
Gut. 2019 May;68(5):854-865
pubmed: 30661054
Dig Dis. 2017;35 Suppl 1:5-13
pubmed: 29421808
Nature. 2014 Feb 20;506(7488):376-81
pubmed: 24390342
Nat Genet. 2019 Sep;51(9):1339-1348
pubmed: 31427789
Case Rep Surg. 2014;2014:171803
pubmed: 24839575
Br J Surg. 1960 May;47:585-95
pubmed: 13818898
Hum Mutat. 2020 May;41(5):973-982
pubmed: 31944481
BMC Cancer. 2014 Jul 18;14:518
pubmed: 25037231
Nat Commun. 2017 Nov 28;8(1):1826
pubmed: 29184056
Nat Commun. 2015 Jan 19;6:5890
pubmed: 25597830
FASEB J. 2019 May;33(5):6632-6642
pubmed: 30802137
Am J Hum Genet. 1993 May;52(5):928-36
pubmed: 8488842
Nucleic Acids Res. 2019 Jan 8;47(D1):D1005-D1012
pubmed: 30445434
Community Genet. 2006;9(1):55-61
pubmed: 16490960
N Engl J Med. 2014 Sep 4;371(10):944-51
pubmed: 25184866
Bioinformatics. 2010 Sep 1;26(17):2190-1
pubmed: 20616382
Am J Gastroenterol. 2019 May;114(5):798-803
pubmed: 30741736
Am J Hum Genet. 2020 May 7;106(5):611-622
pubmed: 32275883
Medicine (Baltimore). 2017 Aug;96(31):e7662
pubmed: 28767586
Int J Colorectal Dis. 2009 Jan;24(1):105-13
pubmed: 18766355

Auteurs

Tenghao Zheng (T)

School of Biological Sciences, Monash University, Clayton, Victoria, Australia.
Unit of Clinical Epidemiology, Department of Medicine Solna, Karolinska Institutet, Stockholm, Sweden.

David Ellinghaus (D)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.
Novo Nordisk Foundation Center for Protein Research, Disease Systems Biology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.

Simonas Juzenas (S)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.
Institute of Biotechnology, Life Science Centre, Vilnius University, Vilnius, Lithuania.

François Cossais (F)

Institute of Anatomy, Christian-Albrechts-University of Kiel, Kiel, Germany.

Greta Burmeister (G)

Department for General, Visceral, Vascular and Transplantation Surgery, University Medical Center Rostock, Rostock, Germany.

Gabriele Mayr (G)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.

Isabella Friis Jørgensen (IF)

Novo Nordisk Foundation Center for Protein Research, Disease Systems Biology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.

Maris Teder-Laving (M)

Institute of Genomics, University of Tartu, Tartu, Estonia.

Anne Heidi Skogholt (AH)

K.G. Jebsen Center for Genetic Epidemiology, Department of Public Health and Nursing, NTNU, Norwegian University of Science and Technology, Trondheim, Norway.

Sisi Chen (S)

Enteric NeuroScience Program, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.

Peter R Strege (PR)

Enteric NeuroScience Program, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.

Go Ito (G)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.
Institute of Advanced Research, Tokyo Medical and Dental University, Tokyo, Japan.

Karina Banasik (K)

Novo Nordisk Foundation Center for Protein Research, Disease Systems Biology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.

Thomas Becker (T)

Department of General-, Visceral- Transplant-, Thoracic and Pediatric Surgery, Kiel University, Kiel, Germany.

Frank Bokelmann (F)

Medical Office for Surgery Preetz, Preetz, Germany.

Søren Brunak (S)

Novo Nordisk Foundation Center for Protein Research, Disease Systems Biology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.

Stephan Buch (S)

Medical Department 1, University Hospital Dresden, Technische Universität Dresden (TU Dresden), Dresden, Germany.

Hartmut Clausnitzer (H)

University Hospital Schleswig-Holstein, Institute of Clinical Chemistry, Thrombosis & Hemostasis Treatment Center, Campus Kiel & Lübeck, Kiel, Germany.

Christian Datz (C)

Department of Internal Medicine, Hospital Oberndorf, Teaching Hospital of the Paracelsus Private Medical University of Salzburg, Oberndorf, Austria.

Frauke Degenhardt (F)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.

Marek Doniec (M)

Medical office for Colo-Proctology Kiel, Kiel, Germany.

Christian Erikstrup (C)

Department of Clinical Immunology, Aarhus University Hospital, Aarhus, Denmark.

Tõnu Esko (T)

Institute of Genomics, University of Tartu, Tartu, Estonia.

Michael Forster (M)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.

Norbert Frey (N)

Department of Internal Medicine III, University Hospital Schleswig-Holstein, Campus Kiel, Kiel, Germany.
Department of Internal Medicine III, University Hospital Heidelberg, Heidelberg, Germany.
DZHK (German Centre for Cardiovascular Research), Partner Site Hamburg/Kiel/Lübeck, Kiel, Germany.

Lars G Fritsche (LG)

Department of Biostatistics, University of Michigan, Ann Arbor, MI, USA.

Maiken Elvestad Gabrielsen (ME)

K.G. Jebsen Center for Genetic Epidemiology, Department of Public Health and Nursing, NTNU, Norwegian University of Science and Technology, Trondheim, Norway.

Tobias Gräßle (T)

Epidemiology of highly pathogenic microorganisms, Robert Koch-Institute, Berlin, Germany.
Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.

Andrea Gsur (A)

Department of Medicine I, Institute of Cancer Research, Medical University Vienna, Vienna, Austria.

Justus Gross (J)

Department for General, Visceral, Vascular and Transplantation Surgery, University Medical Center Rostock, Rostock, Germany.

Jochen Hampe (J)

Medical Department 1, University Hospital Dresden, Technische Universität Dresden (TU Dresden), Dresden, Germany.
Center for Regenerative Therapies Dresden (CRTD), Technische Universität (TU) Dresden, Dresden, Germany.

Alexander Hendricks (A)

Department for General, Visceral, Vascular and Transplantation Surgery, University Medical Center Rostock, Rostock, Germany.

Sebastian Hinz (S)

Department for General, Visceral, Vascular and Transplantation Surgery, University Medical Center Rostock, Rostock, Germany.

Kristian Hveem (K)

K.G. Jebsen Center for Genetic Epidemiology, Department of Public Health and Nursing, NTNU, Norwegian University of Science and Technology, Trondheim, Norway.

Johannes Jongen (J)

Department of Proctological Surgery Park Klinik Kiel, Kiel, Germany.
Proctological Office Kiel, Kiel, Germany.

Ralf Junker (R)

University Hospital Schleswig-Holstein, Institute of Clinical Chemistry, Thrombosis & Hemostasis Treatment Center, Campus Kiel & Lübeck, Kiel, Germany.

Tom Hemming Karlsen (TH)

Research Institute for Internal Medicine, Division of Surgery, Inflammatory Diseases and Transplantation, Oslo University Hospital Rikshospitalet and University of Oslo, Oslo, Norway.

Georg Hemmrich-Stanisak (G)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.

Wolfgang Kruis (W)

Faculty of Medicine, University of Cologne, Cologne, Germany.

Juozas Kupcinskas (J)

Department of Gastroenterology, Institute for Digestive Research, Lithuanian University of Health Sciences, Kaunas, Lithuania.

Tilman Laubert (T)

Department of Proctological Surgery Park Klinik Kiel, Kiel, Germany.
Proctological Office Kiel, Kiel, Germany.
University of Lübeck, Lübeck, Germany.

Philip C Rosenstiel (PC)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.
University Hospital of Schleswig-Holstein (UKSH), Kiel Campus, Kiel, Germany.

Christoph Röcken (C)

Department of Pathology, University Medical Center Schleswig-Holstein, Kiel, Germany.

Matthias Laudes (M)

Division of Endocrinology, Diabetes and Clinical Nutrition, Department of Medicine 1, University of Kiel, Kiel, Germany.

Fabian H Leendertz (FH)

Epidemiology of highly pathogenic microorganisms, Robert Koch-Institute, Berlin, Germany.
Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.

Wolfgang Lieb (W)

Institute of Epidemiology, Christian-Albrechts-University of Kiel, Kiel, Germany.

Verena Limperger (V)

University Hospital Schleswig-Holstein, Institute of Clinical Chemistry, Thrombosis & Hemostasis Treatment Center, Campus Kiel & Lübeck, Kiel, Germany.

Nikolaos Margetis (N)

University of Athens, Athens Euroclinic, Athens, Greece.

Kerstin Mätz-Rensing (K)

Pathology Unit, German Primate Center, Leibniz Institute for Primatology, Göttingen, Germany.

Christopher Georg Németh (CG)

Department of General-, Visceral- Transplant-, Thoracic and Pediatric Surgery, Kiel University, Kiel, Germany.
Department of Ophthalmology, Hospital Frankfurt Hoechst, Frankfurt, Germany.

Eivind Ness-Jensen (E)

K.G. Jebsen Center for Genetic Epidemiology, Department of Public Health and Nursing, NTNU, Norwegian University of Science and Technology, Trondheim, Norway.
Upper Gastrointestinal Surgery, Department of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Department of Medicine, Levanger Hospital, Nord-Trøndelag Hospital Trust, Levanger, Norway.

Ulrike Nowak-Göttl (U)

University Hospital Schleswig-Holstein, Institute of Clinical Chemistry, Thrombosis & Hemostasis Treatment Center, Campus Kiel & Lübeck, Kiel, Germany.

Anita Pandit (A)

Department of Biostatistics, University of Michigan, Ann Arbor, MI, USA.

Ole Birger Pedersen (OB)

Department of Clinical Immunology, Naestved Hospital, Naestved, Denmark.

Hans Günter Peleikis (HG)

Department of Proctological Surgery Park Klinik Kiel, Kiel, Germany.
Proctological Office Kiel, Kiel, Germany.

Kenneth Peuker (K)

Medical Department 1, University Hospital Dresden, Technische Universität Dresden (TU Dresden), Dresden, Germany.
Center for Regenerative Therapies Dresden (CRTD), Technische Universität (TU) Dresden, Dresden, Germany.

Cristina Leal Rodriguez (CL)

Novo Nordisk Foundation Center for Protein Research, Disease Systems Biology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.

Malte Christoph Rühlemann (MC)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.

Bodo Schniewind (B)

General Hospital Lüneburg, Lüneburg, Germany.

Martin Schulzky (M)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.

Jurgita Skieceviciene (J)

Department of Gastroenterology, Institute for Digestive Research, Lithuanian University of Health Sciences, Kaunas, Lithuania.

Jürgen Tepel (J)

Department of General and Thoracic Surgery, Hospital Osnabrück, Osnabrück, Germany.

Laurent Thomas (L)

K.G. Jebsen Center for Genetic Epidemiology, Department of Public Health and Nursing, NTNU, Norwegian University of Science and Technology, Trondheim, Norway.
Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology, Trondheim, Norway.
BioCore - Bioinformatics Core Facility, Norwegian University of Science and Technology, Trondheim, Norway.
Clinic of Laboratory Medicine, St.Olavs Hospital, Trondheim University Hospital, Trondheim, Norway.

Florian Uellendahl-Werth (F)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.

Henrik Ullum (H)

Department of Clinical Immunology, Copenhagen University Hospital, Copenhagen, Denmark.

Ilka Vogel (I)

Department of Surgery, Community Hospital Kiel, Kiel, Germany.

Henry Volzke (H)

Institute for Community Medicine, University Medicine Greifswald, Greifswald, Germany.

Lorenzo von Fersen (L)

Department Research & Conservation, Zoo Nuremberg, Nuremberg, Germany.

Witigo von Schönfels (W)

Department of General-, Visceral- Transplant-, Thoracic and Pediatric Surgery, Kiel University, Kiel, Germany.

Brett Vanderwerff (B)

Department of Biostatistics, University of Michigan, Ann Arbor, MI, USA.

Julia Wilking (J)

Department for General, Visceral, Vascular and Transplantation Surgery, University Medical Center Rostock, Rostock, Germany.

Michael Wittig (M)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany.

Sebastian Zeissig (S)

Medical Department 1, University Hospital Dresden, Technische Universität Dresden (TU Dresden), Dresden, Germany.
Center for Regenerative Therapies Dresden (CRTD), Technische Universität (TU) Dresden, Dresden, Germany.

Myrko Zobel (M)

Department of Gastroenterology, Helios Hospital Weißeritztal, Freital, Germany.

Matthew Zawistowski (M)

Department of Biostatistics, University of Michigan, Ann Arbor, MI, USA.

Vladimir Vacic (V)

23andMe Inc, Sunnyvale, CA, USA.

Olga Sazonova (O)

23andMe Inc, Sunnyvale, CA, USA.

Elizabeth S Noblin (ES)

23andMe Inc, Sunnyvale, CA, USA.

Gianrico Farrugia (G)

Enteric NeuroScience Program, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.

Arthur Beyder (A)

Enteric NeuroScience Program, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.

Thilo Wedel (T)

Institute of Anatomy, Christian-Albrechts-University of Kiel, Kiel, Germany.

Volker Kahlke (V)

Department of Proctological Surgery Park Klinik Kiel, Kiel, Germany.
Proctological Office Kiel, Kiel, Germany.
Christian-Albrechts-University of Kiel, Kiel, Germany.

Clemens Schafmayer (C)

Department for General, Visceral, Vascular and Transplantation Surgery, University Medical Center Rostock, Rostock, Germany.

Mauro D'Amato (M)

School of Biological Sciences, Monash University, Clayton, Victoria, Australia mdamato@cicbiogune.es a.franke@mucosa.de.
Unit of Clinical Epidemiology, Department of Medicine Solna, Karolinska Institutet, Stockholm, Sweden.
Gastrointestinal Genetics Lab, CIC bioGUNE - BRTA, Derio, Spain.
Ikerbasque, Basque Foundation for Science, Bilbao, Spain.

Andre Franke (A)

Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany mdamato@cicbiogune.es a.franke@mucosa.de.
University Hospital of Schleswig-Holstein (UKSH), Kiel Campus, Kiel, Germany.

Classifications MeSH