Improved motor outcome prediction in Parkinson's disease applying deep learning to DaTscan SPECT images.


Journal

Computers in biology and medicine
ISSN: 1879-0534
Titre abrégé: Comput Biol Med
Pays: United States
ID NLM: 1250250

Informations de publication

Date de publication:
05 2021
Historique:
received: 14 12 2020
revised: 26 02 2021
accepted: 03 03 2021
pubmed: 24 4 2021
medline: 6 7 2021
entrez: 23 4 2021
Statut: ppublish

Résumé

Dopamine transporter (DAT) SPECT imaging is routinely used in the diagnosis of Parkinson's disease (PD). Our previous efforts demonstrated the use of DAT SPECT images in a data-driven manner by improving prediction of PD clinical assessment outcome using radiomic features. In this work, we develop a convolutional neural network (CNN) based technique to predict clinical motor function evaluation scores directly from longitudinal DAT SPECT images and non-imaging clinical measures. Data of 252 subjects from the Parkinson's Progression Markers Initiative (PPMI) database were used in this work. The motor part (III) score of the unified Parkinson's disease rating scale (UPDRS) at year 4 was selected as outcome, and the DAT SPECT images and UPDRS_III scores acquired at year 0 and year 1 were used as input data. The specified inputs and outputs were used to develop a CNN based regression method for prediction. Ten-fold cross-validation was used to test the trained network and the absolute difference between predicted and actual scores was used as the performance metric. Prediction using inputs with and without DAT images was evaluated. Using only UPDRS_III scores at year 0 and year 1, the prediction yielded an average difference of 7.6 ± 6.1 between the predicted and actual year 4 motor scores (range [5, 77]). The average difference was reduced to 6.0 ± 4.8 when longitudinal DAT SPECT images were included, which was determined to be statistically significant via a two-sample t-test, and demonstrates the benefit of including images. This study shows that adding DAT SPECT images to UPDRS_III scores as inputs to deep-learning based prediction significantly improves the outcome. Without requiring segmentation and feature extraction, the CNN based prediction method allows easier and more universial application.

Identifiants

pubmed: 33892414
pii: S0010-4825(21)00106-2
doi: 10.1016/j.compbiomed.2021.104312
pii:
doi:

Substances chimiques

Biomarkers 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

104312

Informations de copyright

Copyright © 2021 Elsevier Ltd. All rights reserved.

Auteurs

Matthew P Adams (MP)

Department of Electrical and Computer Engineering, Oakland University, Rochester, MI, USA.

Arman Rahmim (A)

Departments of Radiology and Physics, University of British Columbia, Vancouver, BC, Canada.

Jing Tang (J)

Department of Electrical and Computer Engineering, Oakland University, Rochester, MI, USA; Department of Bioengineering, Oakland University, Rochester, MI, USA. Electronic address: jingtang@gmail.com.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH