Hordeum vulgare
HvClpC1
albostrians
chloroplast development
comparative analysis
genetic mapping
genomic re-sequencing
luteostrians
Journal
Frontiers in plant science
ISSN: 1664-462X
Titre abrégé: Front Plant Sci
Pays: Switzerland
ID NLM: 101568200
Informations de publication
Date de publication:
2021
2021
Historique:
received:
09
02
2021
accepted:
29
03
2021
entrez:
3
5
2021
pubmed:
4
5
2021
medline:
4
5
2021
Statut:
epublish
Résumé
Implementation of next-generation sequencing in forward genetic screens greatly accelerated gene discovery in species with larger genomes, including many crop plants. In barley, extensive mutant collections are available, however, the causative mutations for many of the genes remains largely unknown. Here we demonstrate how a combination of low-resolution genetic mapping, whole-genome resequencing and comparative functional analyses provides a promising path toward candidate identification of genes involved in plastid biology and/or photosynthesis, even if genes are located in recombination poor regions of the genome. As a proof of concept, we simulated the prediction of a candidate gene for the recently cloned variegation mutant
Identifiants
pubmed: 33936155
doi: 10.3389/fpls.2021.664085
pmc: PMC8086601
doi:
Types de publication
Journal Article
Langues
eng
Pagination
664085Informations de copyright
Copyright © 2021 Li, Guo, Pidon, Melzer, Prina, Börner and Stein.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
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