A Reliable Machine Learning Approach applied to Single-Cell Classification in Acute Myeloid Leukemia.


Journal

AMIA ... Annual Symposium proceedings. AMIA Symposium
ISSN: 1942-597X
Titre abrégé: AMIA Annu Symp Proc
Pays: United States
ID NLM: 101209213

Informations de publication

Date de publication:
2020
Historique:
entrez: 3 5 2021
pubmed: 4 5 2021
medline: 22 6 2021
Statut: epublish

Résumé

Machine Learning research applied to the medical field is increasing. However, few of the proposed approaches are actually deployed in clinical settings. One reason is that current methods may not be able to generalize on new unseen instances which differ from the training population, thus providing unreliable classifications. Approaches to measure classification reliability could be useful to assess whether to trust prediction on new cases. Here, we propose a new reliability measure based on the similarity of a new instance to the training set. In particular, we evaluate whether this example would be selected as informative by an instance selection method, in comparison with the available training set. We show that this method distinguishes reliable examples, for which we can trust the classifier's prediction, from unreliable ones, both on simulated data and in a real-case scenario, to distinguish tumor and normal cells in Acute Myeloid Leukemia patients.

Identifiants

pubmed: 33936468
pii: 128_3415411
pmc: PMC8075526

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

925-932

Informations de copyright

©2020 AMIA - All rights reserved.

Références

Genome Biol. 2018 Feb 6;19(1):15
pubmed: 29409532
BMC Med. 2019 Oct 29;17(1):195
pubmed: 31665002
JAMA Netw Open. 2019 Mar 1;2(3):e191095
pubmed: 30901052
Cell. 2019 Mar 7;176(6):1265-1281.e24
pubmed: 30827681
Nat Med. 2019 Jan;25(1):44-56
pubmed: 30617339
Genomics Inform. 2018 Dec;16(4):e17
pubmed: 30602078
Health Aff (Millwood). 2018 May;37(5):694-701
pubmed: 29733705

Auteurs

Giovanna Nicora (G)

Department of Electrical, Computer and Biomedical Engineering, University of Pavia, Pavia, Italy.

Riccardo Bellazzi (R)

Department of Electrical, Computer and Biomedical Engineering, University of Pavia, Pavia, Italy.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH