Comparison of sample types from white-tailed deer (Odocoileus virginianus) for DNA extraction and analyses.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
11 05 2021
Historique:
received: 17 02 2021
accepted: 23 04 2021
entrez: 12 5 2021
pubmed: 13 5 2021
medline: 5 11 2021
Statut: epublish

Résumé

Collection of biological samples for DNA is necessary in a variety of disciplines including disease epidemiology, landscape genetics, and forensics. Quantity and quality of DNA varies depending on the method of collection or media available for collection (e.g., blood, tissue, fecal). Blood is the most common sample collected in vials or on Whatman Flinders Technology Associates (FTA) cards with short- and long-term storage providing adequate DNA for study objectives. The focus of this study was to determine if biological samples stored on Whatman FTA Elute cards were a reasonable alternative to traditional DNA sample collection, storage, and extraction. Tissue, nasal swabs, and ocular fluid were collected from white-tailed deer (Odocoileus virginianus). Tissue samples and nasal swabs acted as a control to compare extraction and DNA suitability for microsatellite analysis for nasal swabs and ocular fluid extracted from FTA Elute cards. We determined that FTA Elute cards improved the extraction time and storage of samples and that nasal swabs and ocular fluid containing pigmented fluid were reasonable alternatives to traditional tissue DNA extractions.

Identifiants

pubmed: 33976279
doi: 10.1038/s41598-021-89390-2
pii: 10.1038/s41598-021-89390-2
pmc: PMC8113455
doi:

Substances chimiques

DNA 9007-49-2

Types de publication

Comparative Study Evaluation Study Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

10003

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Auteurs

Jessie Edson (J)

Pennsylvania Cooperative Fish and Wildlife Research Unit, The Pennsylvania State University, 413 Forest Resources Building, University Park, PA, 16802, USA.

Justin Brown (J)

Department of Veterinary and Biomedical Sciences, The Pennsylvania State University, University Park, PA, 16802, USA.

William L Miller (WL)

Department of Biology, Calvin University, 1726 Knollcrest Circle SE, Grand Rapids, MI, 49546, USA.

W David Walter (WD)

U.S. Geological Survey, Pennsylvania Cooperative Fish and Wildlife Research Unit, The Pennsylvania State University, 403 Forest Resources Building, University Park, PA, 16802, USA. wdw12@psu.edu.

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Classifications MeSH