Comparison of functional and discrete data analysis regimes for Raman spectra.
B-splines
Functional data analysis
Functional principal component analysis
Principal component analysis
Raman spectroscopy
Journal
Analytical and bioanalytical chemistry
ISSN: 1618-2650
Titre abrégé: Anal Bioanal Chem
Pays: Germany
ID NLM: 101134327
Informations de publication
Date de publication:
Sep 2021
Sep 2021
Historique:
received:
05
03
2021
accepted:
16
04
2021
revised:
13
04
2021
pubmed:
16
5
2021
medline:
16
5
2021
entrez:
15
5
2021
Statut:
ppublish
Résumé
Raman spectral data are best described by mathematical functions; however, due to the spectroscopic measurement setup, only discrete points of these functions are measured. Therefore, we investigated the Raman spectral data for the first time in the functional framework. First, we approximated the Raman spectra by using B-spline basis functions. Afterwards, we applied the functional principal component analysis followed by the linear discriminant analysis (FPCA-LDA) and compared the results with those of the classical principal component analysis followed by the linear discriminant analysis (PCA-LDA). In this context, simulation and experimental Raman spectra were used. In the simulated Raman spectra, normal and abnormal spectra were used for a classification model, where the abnormal spectra were built by shifting one peak position. We showed that the mean sensitivities of the FPCA-LDA method were higher than the mean sensitivities of the PCA-LDA method, especially when the signal-to-noise ratio is low and the shift of the peak position is small. However, for a higher signal-to-noise ratio, both methods performed equally. Additionally, a slight improvement of the mean sensitivity could be shown if the FPCA-LDA method was applied to experimental Raman data.
Identifiants
pubmed: 33990853
doi: 10.1007/s00216-021-03360-1
pii: 10.1007/s00216-021-03360-1
pmc: PMC8410698
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
5633-5644Subventions
Organisme : Deutsche Forschungsgemeinschaft
ID : SFB 1076 - Project Number 218627073
Informations de copyright
© 2021. The Author(s).
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