Combining Clinical and Polygenic Risk Improves Stroke Prediction Among Individuals With Atrial Fibrillation.


Journal

Circulation. Genomic and precision medicine
ISSN: 2574-8300
Titre abrégé: Circ Genom Precis Med
Pays: United States
ID NLM: 101714113

Informations de publication

Date de publication:
06 2021
Historique:
pubmed: 25 5 2021
medline: 15 2 2022
entrez: 24 5 2021
Statut: ppublish

Résumé

Atrial fibrillation (AF) is associated with a five-fold increased risk of ischemic stroke. A portion of this risk is heritable; however, current risk stratification tools (CHA Using data from the largest available genome-wide association study in Europeans, we combined over half a million genetic variants to construct a PRS to predict ischemic stroke in patients with AF. We externally validated this PRS in independent data from the UK Biobank, both independently and integrated with clinical risk factors. The integrated PRS and clinical risk factors risk tool had the greatest predictive ability. Compared with the currently recommended risk tool (CHA In patients with AF, there appears to be a significant association between PRS and risk of ischemic stroke. The greatest predictive ability was found with the integration of PRS and clinical risk factors; however, the prediction of stroke remains challenging.

Sections du résumé

BACKGROUND
Atrial fibrillation (AF) is associated with a five-fold increased risk of ischemic stroke. A portion of this risk is heritable; however, current risk stratification tools (CHA
METHODS
Using data from the largest available genome-wide association study in Europeans, we combined over half a million genetic variants to construct a PRS to predict ischemic stroke in patients with AF. We externally validated this PRS in independent data from the UK Biobank, both independently and integrated with clinical risk factors. The integrated PRS and clinical risk factors risk tool had the greatest predictive ability.
RESULTS
Compared with the currently recommended risk tool (CHA
CONCLUSIONS
In patients with AF, there appears to be a significant association between PRS and risk of ischemic stroke. The greatest predictive ability was found with the integration of PRS and clinical risk factors; however, the prediction of stroke remains challenging.

Identifiants

pubmed: 34029116
doi: 10.1161/CIRCGEN.120.003168
pmc: PMC8212575
mid: NIHMS1703703
doi:

Types de publication

Clinical Trial Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

e003168

Subventions

Organisme : NHLBI NIH HHS
ID : T32 HL094274
Pays : United States

Références

Bioinformatics. 2016 Jan 15;32(2):283-5
pubmed: 26395773
Nature. 2021 Mar;591(7849):211-219
pubmed: 33692554
BMJ. 2018 Oct 24;363:k4168
pubmed: 30355576
JAMA Netw Open. 2020 Apr 1;3(4):e202064
pubmed: 32242908
Br J Clin Pharmacol. 2017 Sep;83(9):2096-2106
pubmed: 28390065
Lancet. 2010 May 1;375(9725):1525-35
pubmed: 20435227
JAMA. 2014 Mar 12;311(10):1035-45
pubmed: 24618965
Rev Esp Cardiol (Engl Ed). 2017 Jan;70(1):50
pubmed: 28038729
Stroke. 2012 Dec;43(12):3161-7
pubmed: 23042660
Circ Genom Precis Med. 2021 Apr;14(2):e003304
pubmed: 33651632
Am J Hum Genet. 2020 May 7;106(5):707-716
pubmed: 32386537
Circulation. 2020 Mar 3;141(9):e139-e596
pubmed: 31992061
BMJ. 2017 Nov 28;359:j5058
pubmed: 29183961
Am J Epidemiol. 2017 Nov 1;186(9):1026-1034
pubmed: 28641372
J Am Coll Cardiol. 2018 Oct 16;72(16):1883-1893
pubmed: 30309464
Neurology. 2013 Mar 12;80(11):1009-17
pubmed: 23408865
J Thromb Haemost. 2017 Jun;15(6):1065-1077
pubmed: 28375552
JAMA. 2020 Feb 18;323(7):636-645
pubmed: 32068818
Stroke. 1991 Aug;22(8):983-8
pubmed: 1866765
Chest. 2010 Feb;137(2):263-72
pubmed: 19762550
Nat Genet. 2018 Sep;50(9):1219-1224
pubmed: 30104762
JAMA. 2020 Feb 18;323(7):627-635
pubmed: 32068817
Mol Psychiatry. 2019 Jun;24(6):819-827
pubmed: 30971729
Am J Hum Genet. 2015 Oct 1;97(4):576-92
pubmed: 26430803
Nat Commun. 2019 Dec 20;10(1):5819
pubmed: 31862893
Genet Epidemiol. 2017 Sep;41(6):469-480
pubmed: 28480976
Circulation. 2019 Jul 9;140(2):e125-e151
pubmed: 30686041
Nat Genet. 2018 Apr;50(4):524-537
pubmed: 29531354
JAMA. 2001 Jun 13;285(22):2864-70
pubmed: 11401607

Auteurs

Jack W O'Sullivan (JW)

Division of Cardiology, Department of Medicine (J.W.O., M.T., M.P., H.W., C.T., S.L.C., E.A.A.), Stanford University School of Medicine, Stanford, CA.

Anna Shcherbina (A)

Department of Biomedical Data Science (A.S.), Stanford University School of Medicine, Stanford, CA.
Department of Biomedical Data Science, Stanford University, Stanford, CA (A.S., J.M.J., M.A.R., E.A.A.).

Johanne M Justesen (JM)

Department of Biomedical Data Science, Stanford University, Stanford, CA (A.S., J.M.J., M.A.R., E.A.A.).

Mintu Turakhia (M)

Division of Cardiology, Department of Medicine (J.W.O., M.T., M.P., H.W., C.T., S.L.C., E.A.A.), Stanford University School of Medicine, Stanford, CA.
Center for Digital Health (M.T.), Stanford University School of Medicine, Stanford, CA.
Veterans Affairs Palo Alto Health Care System, Palo Alto, CA (M.T.).

Marco Perez (M)

Division of Cardiology, Department of Medicine (J.W.O., M.T., M.P., H.W., C.T., S.L.C., E.A.A.), Stanford University School of Medicine, Stanford, CA.

Hannah Wand (H)

Division of Cardiology, Department of Medicine (J.W.O., M.T., M.P., H.W., C.T., S.L.C., E.A.A.), Stanford University School of Medicine, Stanford, CA.

Catherine Tcheandjieu (C)

Division of Cardiology, Department of Medicine (J.W.O., M.T., M.P., H.W., C.T., S.L.C., E.A.A.), Stanford University School of Medicine, Stanford, CA.

Shoa L Clarke (SL)

Division of Cardiology, Department of Medicine (J.W.O., M.T., M.P., H.W., C.T., S.L.C., E.A.A.), Stanford University School of Medicine, Stanford, CA.

Manuel A Rivas (MA)

Department of Biomedical Data Science, Stanford University, Stanford, CA (A.S., J.M.J., M.A.R., E.A.A.).

Euan A Ashley (EA)

Division of Cardiology, Department of Medicine (J.W.O., M.T., M.P., H.W., C.T., S.L.C., E.A.A.), Stanford University School of Medicine, Stanford, CA.
Department of Genetics (E.A.A.), Stanford University School of Medicine, Stanford, CA.
Department of Biomedical Data Science, Stanford University, Stanford, CA (A.S., J.M.J., M.A.R., E.A.A.).

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH