A data driven change-point epidemic model for assessing the impact of large gathering and subsequent movement control order on COVID-19 spread in Malaysia.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2021
Historique:
received: 11 11 2020
accepted: 10 05 2021
entrez: 27 5 2021
pubmed: 28 5 2021
medline: 8 6 2021
Statut: epublish

Résumé

The second wave of COVID-19 in Malaysia is largely attributed to a four-day mass gathering held in Sri Petaling from February 27, 2020, which contributed to an exponential rise of COVID-19 cases in the country. Starting from March 18, 2020, the Malaysian government introduced four consecutive phases of a Movement Control Order (MCO) to stem the spread of COVID-19. The MCO was implemented through various non-pharmaceutical interventions (NPIs). The reported number of cases reached its peak by the first week of April and then started to reduce, hence proving the effectiveness of the MCO. To gain a quantitative understanding of the effect of MCO on the dynamics of COVID-19, this paper develops a class of mathematical models to capture the disease spread before and after MCO implementation in Malaysia. A heterogeneous variant of the Susceptible-Exposed-Infected-Recovered (SEIR) model is developed with additional compartments for asymptomatic transmission. Further, a change-point is incorporated to model disease dynamics before and after intervention which is inferred based on data. Related statistical analyses for inference are developed in a Bayesian framework and are able to provide quantitative assessments of (1) the impact of the Sri Petaling gathering, and (2) the extent of decreasing transmission during the MCO period. The analysis here also quantitatively demonstrates how quickly transmission rates fall under effective NPI implementation within a short time period. The models and methodology used provided important insights into the nature of local transmissions to decision makers in the Ministry of Health, Malaysia.

Identifiants

pubmed: 34043676
doi: 10.1371/journal.pone.0252136
pii: PONE-D-20-35471
pmc: PMC8158983
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0252136

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Références

Euro Surveill. 2020 Feb;25(5):
pubmed: 32046819
Biostatistics. 2016 Oct;17(4):619-33
pubmed: 26993062
PLoS One. 2020 Aug 6;15(8):e0236776
pubmed: 32760158
Nat Med. 2020 Jun;26(6):855-860
pubmed: 32322102
MMWR Morb Mortal Wkly Rep. 2020 Apr 03;69(13):377-381
pubmed: 32240128
MMWR Morb Mortal Wkly Rep. 2020 Apr 10;69(14):411-415
pubmed: 32271722
Epidemics. 2018 Sep;24:98-104
pubmed: 29567063
Lancet Infect Dis. 2020 Sep;20(9):e238-e244
pubmed: 32628905
Math Biosci. 2008 Oct;215(2):177-85
pubmed: 18722386
Biostatistics. 2016 Oct;17(4):779-92
pubmed: 27324411
Wellcome Open Res. 2020 Apr 2;5:59
pubmed: 32529040
Lancet Public Health. 2020 May;5(5):e279-e288
pubmed: 32311320
Int J Infect Dis. 2020 Oct;99:466-472
pubmed: 32829052
J Infect Dis. 2020 May 11;221(11):1757-1761
pubmed: 32067043
Stat Sci. 2014 May;29(2):285-301
pubmed: 25324592
Math Biosci. 2020 Jul;325:108364
pubmed: 32360770
Science. 2020 Jul 10;369(6500):
pubmed: 32414780
Epidemics. 2019 Dec;29:100356
pubmed: 31624039

Auteurs

Sarat C Dass (SC)

School of Mathematical and Computer Sciences, Heriot-Watt University Malaysia, Putrajaya, Wilayah Persekutuan Putrajaya, Malaysia.

Wai M Kwok (WM)

School of Mathematical and Computer Sciences, Heriot-Watt University Malaysia, Putrajaya, Wilayah Persekutuan Putrajaya, Malaysia.

Gavin J Gibson (GJ)

School of Mathematical and Computer Sciences, Heriot-Watt University, Edinburgh, Scotland, United Kingdom.

Balvinder S Gill (BS)

Institute for Medical Research, Ministry of Health, Shah Alam, Selangor, Malaysia.

Bala M Sundram (BM)

Institute for Medical Research, Ministry of Health, Shah Alam, Selangor, Malaysia.

Sarbhan Singh (S)

Institute for Medical Research, Ministry of Health, Shah Alam, Selangor, Malaysia.

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