Unraveling the antitrypanosomal mechanism of benznidazole and related 2-nitroimidazoles: From prodrug activation to DNA damage.


Journal

Molecular microbiology
ISSN: 1365-2958
Titre abrégé: Mol Microbiol
Pays: England
ID NLM: 8712028

Informations de publication

Date de publication:
08 2021
Historique:
revised: 17 05 2021
received: 03 02 2021
accepted: 29 05 2021
pubmed: 2 6 2021
medline: 29 12 2021
entrez: 1 6 2021
Statut: ppublish

Résumé

Nitroheterocycles represent an important class of compound used to treat trypanosomiasis. They often function as prodrugs and can undergo type I nitroreductase (NTR1)-mediated activation before promoting their antiparasitic activities although the nature of these downstream effects has yet to be determined. Here, we show that in an NTR1-dependent process, benznidazole promotes DNA damage in the nuclear genome of Trypanosoma brucei, providing the first direct link between activation of this prodrug and a downstream trypanocidal mechanism. Phenotypic and protein expression studies revealed that components of the trypanosome's homologous recombination (HR) repair pathway (TbMRE11, γH2A, TbRAD51) cooperate to resolve the benznidazole-induced damage, indicating that the prodrug-induced lesions are most likely double stand DNA breaks, while the sequence/recruitment kinetics of these factors parallels that in other eukaryotes HR systems. When extended to other NTR1-activated 2-nitroimidazoles, some were shown to promote DNA damage. Intriguingly, the lesions induced by these required TbMRE11 and TbCSB activities to fix leading us to postulate that TbCSB may operate in systems other than the transcription-coupled nucleotide excision repair pathway. Understanding how existing trypanosomal drugs work will aid future drug design and help unlock novel reactions/pathways that could be exploited as targets for therapeutic intervention.

Identifiants

pubmed: 34061384
doi: 10.1111/mmi.14763
doi:

Substances chimiques

Nitroimidazoles 0
Prodrugs 0
Trypanocidal Agents 0
Nitroreductases EC 1.7.-
benzonidazole YC42NRJ1ZD

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

674-689

Informations de copyright

© 2021 John Wiley & Sons Ltd.

Références

Alsford, S., Eckert, S., Baker, N., Glover, L., Sanchez-Flores, A., Leung, K.F. et al. (2012) High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature, 482, 232-236. https://doi.org/10.1038/nature10771
Alsford, S., Kawahara, T., Glover, L. & Horn, D. (2005) Tagging a T. brucei RRNA locus improves stable transfection efficiency and circumvents inducible expression position effects. Molecular and Biochemical Parasitology, 144, 142-148. https://doi.org/10.1016/j.molbiopara.2005.08.009
Babokhov, P., Sanyaolu, A.O., Oyibo, W.A., Fagbenro-Beyioku, A.F. & Iriemenam, N.C. (2013) A current analysis of chemotherapy strategies for the treatment of human African trypanosomiasis. Pathogens and Global Health, 107, 242-252. https://doi.org/10.1179/2047773213Y.0000000105
Batenburg, N.L., Thompson, E.L., Hendrickson, E.A. & Zhu, X.D. (2015) Cockayne syndrome group B protein regulates DNA double-strand break repair and checkpoint activation. EMBO Journal, 34, 1399-1416.
Beneke, T., Madden, R., Makin, L., Valli, J., Sunter, J. & Gluenz, E. (2017) A CRISPR Cas9 high-throughput genome editing toolkit for kinetoplastids. Royal Society Open Science, 4, 170095. https://doi.org/10.1098/rsos.170095
Bennett, C., Straily, A., Haselow, D., Weinstein, S., Taffner, R., Yaglom, H. et al. (2018) Chagas disease surveillance activities - seven states, 2017. MMWR. Morbidity and Mortality Weekly Report, 67, 738-741. https://doi.org/10.15585/mmwr.mm6726a2
Blumenstiel, K., Schoneck, R., Yardley, V., Croft, S.L. & Krauth-Siegel, R.L. (1999) Nitrofuran drugs as common subversive substrates of Trypanosoma cruzi lipoamide dehydrogenase and trypanothione reductase. Biochemical Pharmacology, 58, 1791-1799. https://doi.org/10.1016/S0006-2952(99)00264-6
Bot, C., Hall, B.S., Álvarez, G., Di Maio, R., González, M., Cerecetto, H. et al. (2013) Evaluating 5-nitrofurans as trypanocidal agents. Antimicrobial Agents Chemotherapy, 57, 1638-1647.
Campos, M.C., Leon, L.L., Taylor, M.C. & Kelly, J.M. (2014) Benznidazole-resistance in Trypanosoma cruzi: evidence that distinct mechanisms can act in concert. Molecular and Biochemical Parasitology, 193, 17-19. https://doi.org/10.1016/j.molbiopara.2014.01.002
Campos, M.C., Phelan, J., Francisco, A.F., Taylor, M.C., Lewis, M.D., Pain, A. et al. (2017) Genome-wide mutagenesis and multi-drug resistance in American trypanosomes induced by the front-line drug benznidazole. Scientific Reports, 7, 14407. https://doi.org/10.1038/s41598-017-14986-6
Cannan, W.J. & Pederson, D.S. (2016) Mechanisms and consequences of double-strand DNA break formation in chromatin. Journal of Cellular Physiology, 231, 3-14. https://doi.org/10.1002/jcp.25048
Conway, C., Proudfoot, C., Burton, P., Barry, J.D. & McCulloch, R. (2002) Two pathways of homologous recombination in Trypanosoma brucei. Molecular Microbiology, 45, 1687-1700.
Dattani, A. & Wilkinson, S.R. (2019) Deciphering the interstrand crosslink DNA repair network expressed by Trypanosoma brucei. DNA Repair (Amst), 78, 154-166. https://doi.org/10.1016/j.dnarep.2019.04.009
Deeks, E.D. (2019) Fexinidazole: first global approval. Drugs, 79, 215-220. https://doi.org/10.1007/s40265-019-1051-6
Diaz de Toranzo, E.G., Castro, J.A., Franke de Cazzulo, B.M. & Cazzulo, J.J. (1998) Interaction of benznidazole reactive metabolites with nuclear and kinetoplastic DNA, proteins and lipids from Trypanosoma cruzi. Experientia, 44, 880-881. https://doi.org/10.1007/BF01941187
Diaz-Viraque, F., Chiribao, M.L., Trochine, A., Gonzalez-Herrera, F., Castillo, C., Liempi, A. et al. (2018) Old yellow enzyme from Trypanosoma cruzi exhibits in vivo prostaglandin F2alpha synthase activity and has a key role in parasite infection and drug susceptibility. Frontiers in Immunology, 9, 456.
Docampo, R. & Stoppani, A.O. (1979) Generation of superoxide anion and hydrogen peroxide induced by nifurtimox in Trypanosoma cruzi. Archives of Biochemistry and Biophysics, 197, 317-321. https://doi.org/10.1016/0003-9861(79)90251-0
Dufernez, F., Yernaux, C., Gerbod, D., Noel, C., Chauvenet, M., Wintjens, R. et al. (2006) The presence of four iron-containing superoxide dismutase isozymes in trypanosomatidae: characterization, subcellular localization, and phylogenetic origin in Trypanosoma brucei. Free Radical Biology and Medicine, 40, 210-225. https://doi.org/10.1016/j.freeradbiomed.2005.06.021
Edwards, D.I. (1993) Nitroimidazole drugs-action and resistance mechanisms. I. Mechanisms of action. Journal of Antimicrobial Chemotherapy, 31, 9-20.
Ferreira, R.C. & Ferreira, L.C. (1986) Mutagenicity of nifurtimox and benznidazole in the Salmonella/microsome assay. Brazilian Journal of Medical and Biological Research, 19, 19-25.
Franco, J.R., Cecchi, G., Priotto, G., Paone, M., Diarra, A., Grout, L. et al. (2020) Monitoring the elimination of human African trypanosomiasis at continental and country level: update to 2018. PLoS Neglected Tropical Diseases, 14, e0008261. https://doi.org/10.1371/journal.pntd.0008261
Garcia-Huertas, P., Mejia-Jaramillo, A.M., Machado, C.R., Guimaraes, A.C. & Triana-Chavez, O. (2017) Prostaglandin F2alpha synthase in Trypanosoma cruzi plays critical roles in oxidative stress and susceptibility to benznidazole. Royal Society Open Science, 4, 170773.
Glover, L. & Horn, D. (2012) Trypanosomal histone γH2A and the DNA damage response. Molecular and Biochemical Parasitology, 183, 78-83. https://doi.org/10.1016/j.molbiopara.2012.01.008
Goijman, S.G., Frasch, A.C. & Stoppani, A.O. (1985) Damage of Trypanosoma cruzi deoxyribonucleic acid by nitroheterocyclic drugs. Biochemical Pharmacology, 24, 1457-1491. https://doi.org/10.1016/0006-2952(85)90684-7
Goijman, S.G. & Stoppani, A.O. (1985) Effects of nitroheterocyclic drugs on macromolecule synthesis and degradation in Trypanosoma cruzi. Biochemical Pharmacology, 34, 1331-1336. https://doi.org/10.1016/0006-2952(85)90514-3
Gomes Passos Silva, D., da Silva Santos, S., Nardelli, S.C., Mendes, I.C., Freire, A.C.G., Repolês, B.M. et al. (2018) The in vivo and in vitro roles of Trypanosoma cruzi Rad51 in the repair of DNA double strand breaks and oxidative lesions. PLoS Neglected Tropical Diseases, 12, e0006875. https://doi.org/10.1371/journal.pntd.0006875
Haince, J.F., McDonald, D., Rodrigue, A., Déry, U., Masson, J.Y., Hendzel, M.J. et al. (2008) PARP1-dependent kinetics of recruitment of MRE11 and NBS1 proteins to multiple DNA damage sites. Journal of Biological Chemistry, 283, 1197-1208. https://doi.org/10.1074/jbc.M706734200
Hall, B.S., Bot, C. & Wilkinson, S.R. (2011) Nifurtimox activation by trypanosomal type I nitroreductases generates cytotoxic nitrile metabolites. Journal of Biological Chemistry, 286, 13088-13095. https://doi.org/10.1074/jbc.M111.230847
Hall, B.S. & Wilkinson, S.R. (2012) Activation of benznidazole by trypanosomal type I nitroreductases results in glyoxal formation. Antimicrobial Agents and Chemotherapy, 56, 115-123. https://doi.org/10.1128/AAC.05135-11
Hirumi, H. & Hirumi, K. (1989) Continuous cultivation of Trypanosoma brucei blood stream forms in a medium containing a low concentration of serum protein without feeder cell layers. Journal of Parasitology, 75, 985-989. https://doi.org/10.2307/3282883
Kedderis, G.L., Argenbright, L.S. & Miwa, G.T. (1989) Covalent interaction of 5-nitroimidazoles with DNA and protein in vitro: mechanism of reductive activation. Chemical Research in Toxicology, 2, 146-149. https://doi.org/10.1021/tx00009a004
Kubata, B.K., Kabututu, Z., Nozaki, T., Munday, C.J., Fukuzumi, S., Ohkubo, K. et al. (2002) A key role for old yellow enzyme in the metabolism of drugs by Trypanosoma cruzi. Journal of Experimental Medicine, 196, 1241-1251. https://doi.org/10.1084/jem.20020885
Lee, B.Y., Bacon, K.M., Bottazzi, M.E. & Hotez, P.J. (2013) Global economic burden of Chagas disease: a computational simulation model. The Lancet Infectious Diseases, 13, 342-348. https://doi.org/10.1016/S1473-3099(13)70002-1
Liu, Y., Matsumoto, M., Ishida, H., Ohguro, K., Yoshitake, M., Gupta, R. et al. (2018) Delamanid: from discovery to its use for pulmonary multidrug-resistant tuberculosis (MDR-TB). Tuberculosis (Edinb), 111, 20-30. https://doi.org/10.1016/j.tube.2018.04.008
Machado, C.R., Vieira-da-Rocha, J.P., Mendes, I.C., Rajao, M.A., Marcello, L., Bitar, M. et al. (2014) Nucleotide excision repair in Trypanosoma brucei: specialization of transcription-coupled repair due to multigenic transcription. Molecular Microbiology, 92, 756-776.
Marin, P.A., da Silva, M.S., Pavani, R.S., Machado, C.R. & Elias, M.C. (2018) Recruitment kinetics of the homologous recombination pathway in procyclic forms of Trypanosoma brucei after ionizing radiation treatment. Scientific Reports, 8, 5405.
Mateo, H., Marin, C., Perez-Cordon, G. & Sánchez-Moreno, M. (2008) Purification and biochemical characterization of four iron superoxide dismutases in Trypanosoma cruzi. Memorias do Instituto Oswaldo Cruz, 103, 271-276. https://doi.org/10.1590/S0074-02762008000300008
Mejia, A.M., Hall, B.S., Taylor, M.C., Gomez-Palacio, A., Wilkinson, S.R., Triana-Chavez, O. et al. (2012) Benznidazole-resistance in Trypanosoma cruzi is a readily acquired trait that can arise independently in a single population. Journal of Infectious Diseases, 206, 220-228. https://doi.org/10.1093/infdis/jis331
Mejia-Jaramillo, A.M., Fernandez, G.J., Palacio, L. & Triana-Chavez, O. (2011) Gene expression study using real-time PCR identifies an NTR gene as a major marker of resistance to benzonidazole in Trypanosoma cruzi. Parasit Vectors, 4, 169.
Menoni, H., Hoeijmakers, J.H. & Vermeulen, W. (2012) Nucleotide excision repair-initiating proteins bind to oxidative DNA lesions in vivo. Journal of Cell Biology, 199, 1037-1046. https://doi.org/10.1083/jcb.201205149
Menoni, H., Wienholz, F., Theil, A.F., Janssens, R.C., Lans, H., Campalans, A. et al. (2018) The transcription-coupled DNA repair-initiating protein CSB promotes XRCC1 recruitment to oxidative DNA damage. Nucleic Acids Research, 46, 7747-7756.
Meredith, E.M., Kumar, A., Konno, A., Szular, J., Alsford, S., Seifert, K. et al. (2017) Distinct activation mechanisms trigger the trypanocidal activity of DNA damaging prodrugs. Molecular Microbiology, 106, 207-222. https://doi.org/10.1111/mmi.13767
Mesu, V., Kalonji, W.M., Bardonneau, C., Mordt, O.V., Blesson, S., Simon, F. et al. (2018) Oral fexinidazole for late-stage African Trypanosoma brucei gambiense trypanosomiasis: a pivotal multicentre, randomised, non-inferiority trial. Lancet, 391, 144-154. https://doi.org/10.1016/S0140-6736(17)32758-7
Migchelsen, S.J., Buscher, P., Hoepelman, A.I., Schallig, H.D. & Adams, E.R. (2011) Human African trypanosomiasis: a review of non-endemic cases in the past 20 years. International Journal of Infectious Diseases, 15, e517-e524. https://doi.org/10.1016/j.ijid.2011.03.018
Moreno, S.N.J., Docampo, R., Mason, R.P., Leon, W. & Stoppani, A. (1982) Different behaviors of benznidazole as free radical generator with mammalian and Trypanosoma cruzi microsomal preparations. Archives of Biochemistry and Biophysics, 218, 585-591. https://doi.org/10.1016/0003-9861(82)90383-6
Passos-Silva, D.G., Rajao, M.A., Nascimento de Aguiar, P.H., Vieira-da-Rocha, J.P., Machado, C.R. & Furtado, C. (2010) Overview of DNA repair in Trypanosoma cruzi, Trypanosoma brucei, and Leishmania major. Journal of Nucleic Acids, 1-14. https://doi.org/10.4061/2010/840768
Patterson, S. & Fairlamb, A.H. (2019) Current and future prospects of nitro-compounds as drugs for trypanosomiasis and leishmaniasis. Current Medicinal Chemistry, 26, 4454-4475. https://doi.org/10.2174/0929867325666180426164352
Patterson, S. & Wyllie, S. (2014) Nitro drugs for the treatment of trypanosomatid diseases: past, present, and future prospects. Trends in Parasitology, 30, 289-298. https://doi.org/10.1016/j.pt.2014.04.003
Perez-Molina, J.A. & Molina, I. (2018) Chagas disease. Lancet, 391, 82-94. https://doi.org/10.1016/S0140-6736(17)31612-4
Prathalingham, S.R., Wilkinson, S.R., Horn, D. & Kelly, J.M. (2007) Deletion of the Trypanosoma brucei superoxide dismutase gene sodb1 increases sensitivity to nifurtimox and benznidazole. Antimicrobial Agents and Chemotherapy, 51, 755-758. https://doi.org/10.1128/AAC.01360-06
Rajao, M.A., Furtado, C., Alves, C.L., Passos-Silva, D.G., de Moura, M.B., Schamber-Reis, B.L. et al. (2014) Unveiling benznidazole’s mechanism of action through overexpression of DNA repair proteins in Trypanosoma cruzi. Environmental and Molecular Mutagenesis, 55, 309-321.
Requena-Mendez, A., Moore, D.A., Subira, C. & Munoz, J. (2016) Addressing the neglect: Chagas disease in London, UK. The Lancet Global Health, 4, e231-e233. https://doi.org/10.1016/S2214-109X(16)00047-4
Robinson, N.P., McCulloch, R., Conway, C., Browitt, A. & Barry, J.D. (2002) Inactivation of Mre11 does not affect VSG gene duplication mediated by homologous recombination in Trypanosoma brucei. Journal of Biological Chemistry, 277, 26185-26193. https://doi.org/10.1074/jbc.M203205200
Schoneck, R., Billaut-Mulot, O., Numrich, P., Ouaissi, M.A. & Krauth-Siegel, R.L. (1997) Cloning, sequencing and functional expression of dihydrolipoamide dehydrogenase from the human pathogen Trypanosoma cruzi. European Journal of Biochemistry, 243, 739-747. https://doi.org/10.1111/j.1432-1033.1997.00739.x
Schumann Burkard, G., Jutzi, P. & Roditi, I. (2011) Genome-wide RNAi screens in bloodstream form trypanosomes identify drug transporters. Molecular and Biochemical Parasitology, 175, 91-94. https://doi.org/10.1016/j.molbiopara.2010.09.002
Shaw, A.P., Cecchi, G., Wint, G.R., Mattioli, R.C. & Robinson, T.P. (2014) Mapping the economic benefits to livestock keepers from intervening against bovine trypanosomosis in Eastern Africa. Preventive Veterinary Medicine, 113, 197-210.
Siegel, T.N., Hekstra, D.R. & Cross, G.A. (2008) Analysis of the Trypanosoma brucei cell cycle by quantitative DAPI imaging. Molecular and Biochemical Parasitology, 160, 171-174. https://doi.org/10.1016/j.molbiopara.2008.04.004
Simarro, P.P., Franco, J.R., Cecchi, G., Paone, M., Diarra, A., Ruiz Postigo, J.A. et al. (2012) Human African trypanosomiasis in non-endemic countries (2000-2010). Journal of Travel Medicine, 19, 44-53. https://doi.org/10.1111/j.1708-8305.2011.00576.x
Stevnsner, T., Muftuoglu, M., Aamann, M.D. & Bohr, V.A. (2008) The role of Cockayne syndrome group B (CSB) protein in base excision repair and aging. Mechanisms of Ageing and Development, 129, 441-448. https://doi.org/10.1016/j.mad.2008.04.009
Sullivan, J.A., Tong, J.L., Wong, M., Kumar, A., Sarkar, H., Ali, S. et al. (2015) Unravelling the role of SNM1 in the DNA repair system of Trypanosoma brucei. Molecular Microbiology, 96, 827-838.
Tan, K.S., Leal, S.T. & Cross, G.A. (2002) Trypanosoma brucei MRE11 is non-essential but influences growth, homologous recombination and DNA double-strand break repair. Molecular and Biochemical Parasitology, 125, 11-21.
Temperton, N.J., Wilkinson, S.R., Meyer, D.J. & Kelly, J.M. (1998) Overexpression of superoxide dismutase in Trypanosoma cruzi results in increased sensitivity to the trypanocidal agents gentian violet and benznidazole. Molecular and Biochemical Parasitology, 96, 167-176. https://doi.org/10.1016/S0166-6851(98)00127-3
Thakare, R., Dasgupta, A. & Chopra, S. (2020) Pretomanid for the treatment of pulmonary tuberculosis. Drugs Today (Barc), 56, 655-668. https://doi.org/10.1358/dot.2020.56.10.3161237
Trochine, A., Creek, D.J., Faral-Tello, P., Barrett, M.P. & Robello, C. (2014) Benznidazole biotransformation and multiple targets in Trypanosoma cruzi revealed by metabolomics. PLoS Neglected Tropical Diseases, 8, e2844. https://doi.org/10.1371/journal.pntd.0002844
Vieira-da-Rocha, J.P., Passos-Silva, D.G., Mendes, I.C., Rocha, E.A., Gomes, D.A., Machado, C.R. et al. (2019) The DNA damage response is developmentally regulated in the African trypanosome. DNA Repair (Amst), 73, 78-90. https://doi.org/10.1016/j.dnarep.2018.11.005
Viode, C., Bettache, N., Cenas, N., Krauth-Siegel, R.L., Chauviere, G., Bakalara, N. et al. (1999) Enzymatic reduction studies of nitroheterocycles. Biochemical Pharmacology, 57, 549-557. https://doi.org/10.1016/S0006-2952(98)00324-4
Wei, L., Levine, A.S. & Lan, L. (2016) Transcription-coupled homologous recombination after oxidative damage. DNA Repair (Amst), 44, 76-80.
WHO. (2015) Chagas disease in Latin America: an epidemiological update based on 2010 estimates. Weekly Epidemiological Record, 90, 33-43.
Wilkinson, S.R., Bot, C., Kelly, J.M. & Hall, B.S. (2011) Trypanocidal activity of nitroaromatic prodrugs: current treatments and future perspectives. Current Topics in Medicinal Chemistry, 11, 2072-2084.
Wilkinson, S.R. & Kelly, J.M. (2009) Trypanocidal drugs: mechanisms, resistance and new targets. Expert Reviews in Molecular Medicine, 11, e31. https://doi.org/10.1017/S1462399409001252
Wilkinson, S.R., Prathalingam, S.R., Taylor, M.C., Ahmed, A., Horn, D. & Kelly, J.M. (2006) Functional characterisation of the iron superoxide dismutase gene repertoire in Trypanosoma brucei. Free Radical Biology and Medicine, 40, 198-209. https://doi.org/10.1016/j.freeradbiomed.2005.06.022
Wilkinson, S.R., Taylor, M.C., Horn, D., Kelly, J.M. & Cheeseman, I. (2008) A mechanism for cross-resistance to nifurtimox and benznidazole in trypanosomes. Proceedings of the National Academy of Sciences USA, 105, 5022-5027. https://doi.org/10.1073/pnas.0711014105
Woodward, R. & Gull, K. (1990) Timing of nuclear and kinetoplast DNA replication and early morphological events in the cell cycle of Trypanosoma brucei. Journal of Cell Science, 95, 49-57. https://doi.org/10.1242/jcs.95.1.49
Wyllie, S., Foth, B.J., Kelner, A., Sokolova, A.Y., Berriman, M. & Fairlamb, A.H. (2016) Nitroheterocyclic drug resistance mechanisms in Trypanosoma brucei. Journal of Antimicrobial Chemotherapy, 71, 625-634.

Auteurs

Ambika Dattani (A)

School of Biological & Chemical Sciences, Queen Mary University of London, London, UK.

Isatou Drammeh (I)

School of Biological & Chemical Sciences, Queen Mary University of London, London, UK.

Aishah Mahmood (A)

School of Biological & Chemical Sciences, Queen Mary University of London, London, UK.

Mahbubur Rahman (M)

School of Biological & Chemical Sciences, Queen Mary University of London, London, UK.

Joanna Szular (J)

School of Biological & Chemical Sciences, Queen Mary University of London, London, UK.

Shane R Wilkinson (SR)

School of Biological & Chemical Sciences, Queen Mary University of London, London, UK.

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