SurvBoost: An R Package for High-Dimensional Variable Selection in the Stratified Proportional Hazards Model via Gradient Boosting.
Journal
The R journal
ISSN: 2073-4859
Titre abrégé: R J
Pays: United States
ID NLM: 101554666
Informations de publication
Date de publication:
Jun 2020
Jun 2020
Historique:
entrez:
7
6
2021
pubmed:
8
6
2021
medline:
8
6
2021
Statut:
ppublish
Résumé
High-dimensional variable selection in the proportional hazards (PH) model has many successful applications in different areas. In practice, data may involve confounding variables that do not satisfy the PH assumption, in which case the stratified proportional hazards (SPH) model can be adopted to control the confounding effects by stratification without directly modeling the confounding effects. However, there is a lack of computationally efficient statistical software for high-dimensional variable selection in the SPH model. In this work an R package,
Identifiants
pubmed: 34094592
doi: 10.32614/rj-2020-018
pmc: PMC8174798
mid: NIHMS1656432
doi:
Types de publication
Journal Article
Langues
eng
Pagination
105-117Subventions
Organisme : NIDA NIH HHS
ID : R01 DA048993
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM124061
Pays : United States
Organisme : NIMH NIH HHS
ID : R01 MH105561
Pays : United States
Références
BMC Cancer. 2007 Sep 25;7:182
pubmed: 17894856
Lancet. 2005 Feb 19-25;365(9460):671-9
pubmed: 15721472
Biom J. 2010 Feb;52(1):70-84
pubmed: 19937997
Am J Pathol. 1999 Dec;155(6):2057-66
pubmed: 10595935
BMC Cancer. 2007 Jan 03;7:2
pubmed: 17201906
Endocr Relat Cancer. 2006 Dec;13(4):1109-20
pubmed: 17158757
Cancer Cell. 2006 Dec;10(6):529-41
pubmed: 17157792
J Stat Softw. 2011 Mar;39(5):1-13
pubmed: 27065756
Biometrics. 2000 Mar;56(1):256-62
pubmed: 10783804
Stat Med. 1997 Feb 28;16(4):385-95
pubmed: 9044528
Breast Cancer Res Treat. 2012 May;133(1):37-47
pubmed: 21814749
Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13550-5
pubmed: 16141321
Nat Cell Biol. 2012 Nov;14(11):1212-22
pubmed: 23086238
Oncogene. 2007 Mar 1;26(10):1507-16
pubmed: 16936776
Int J Cancer. 2008 Mar 15;122(6):1324-32
pubmed: 17999412
Bioinformatics. 2016 Jan 1;32(1):50-7
pubmed: 26382192