Examining the dynamics of Epstein-Barr virus shedding in the tonsils and the impact of HIV-1 coinfection on daily saliva viral loads.


Journal

PLoS computational biology
ISSN: 1553-7358
Titre abrégé: PLoS Comput Biol
Pays: United States
ID NLM: 101238922

Informations de publication

Date de publication:
06 2021
Historique:
received: 27 10 2020
accepted: 12 05 2021
revised: 01 07 2021
pubmed: 22 6 2021
medline: 21 10 2021
entrez: 21 6 2021
Statut: epublish

Résumé

Epstein-Barr virus (EBV) is transmitted by saliva and is a major cause of cancer, particularly in people living with HIV/AIDS. Here, we describe the frequency and quantity of EBV detection in the saliva of Ugandan adults with and without HIV-1 infection and use these data to develop a novel mathematical model of EBV infection in the tonsils. Eligible cohort participants were not taking antiviral medications, and those with HIV-1 infection had a CD4 count >200 cells/mm3. Over a 4-week period, participants provided daily oral swabs that we analysed for the presence and quantity of EBV. Compared with HIV-1 uninfected participants, HIV-1 coinfected participants had an increased risk of EBV detection in their saliva (IRR = 1.27, 95% CI = 1.10-1.47) and higher viral loads in positive samples. We used these data to develop a stochastic, mechanistic mathematical model that describes the dynamics of EBV, infected cells, and immune response within the tonsillar epithelium to analyse potential factors that may cause EBV infection to be more severe in HIV-1 coinfected participants. The model, fit using Approximate Bayesian Computation, showed high fidelity to daily oral shedding data and matched key summary statistics. When evaluating how model parameters differed among participants with and without HIV-1 coinfection, results suggest HIV-1 coinfected individuals have higher rates of B cell reactivation, which can seed new infection in the tonsils and lower rates of an EBV-specific immune response. Subsequently, both these traits may explain higher and more frequent EBV detection in the saliva of HIV-1 coinfected individuals.

Identifiants

pubmed: 34153032
doi: 10.1371/journal.pcbi.1009072
pii: PCOMPBIOL-D-20-01942
pmc: PMC8248743
doi:

Banques de données

Dryad
['10.5061/dryad.w6m905qkh']

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e1009072

Subventions

Organisme : NCI NIH HHS
ID : P30 CA015704
Pays : United States
Organisme : NIAID NIH HHS
ID : P01 AI030731
Pays : United States
Organisme : NIAID NIH HHS
ID : K23 AI054162
Pays : United States
Organisme : NIAID NIH HHS
ID : P30 AI027757
Pays : United States
Organisme : NIAID NIH HHS
ID : K24 AI071113
Pays : United States
Organisme : FIC NIH HHS
ID : D43 TW009759
Pays : United States
Organisme : NIAID NIH HHS
ID : K23 AI079394
Pays : United States

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist. Author Fred Okuku was unable to confirm his authorship contributions. On his behalf, the corresponding author has reported their contributions to the best of their knowledge.

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Auteurs

Catherine M Byrne (CM)

Department of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia, Canada.
Institute of Applied Mathematics, University of British Columbia, Vancouver, British Columbia, Canada.
British Columbia Children's Hospital Research Institute, Vancouver, British Columbia, Canada.

Christine Johnston (C)

Department of Medicine, University of Washington, Seattle, Washington, United States of America.
Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.

Jackson Orem (J)

Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Uganda Cancer Institute, Kampala, Uganda.

Fred Okuku (F)

Uganda Cancer Institute, Kampala, Uganda.

Meei-Li Huang (ML)

Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Department of Laboratory Medicine, University of Washington, Seattle, Washington, United States of America.

Habibur Rahman (H)

Faculty of Medicine, University of British Columbia, Vancouver, British Columbia, Canada.

Anna Wald (A)

Department of Medicine, University of Washington, Seattle, Washington, United States of America.
Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Department of Laboratory Medicine, University of Washington, Seattle, Washington, United States of America.
Department of Epidemiology, University of Washington, Seattle, Washington, United States of America.

Lawrence Corey (L)

Department of Medicine, University of Washington, Seattle, Washington, United States of America.
Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Department of Laboratory Medicine, University of Washington, Seattle, Washington, United States of America.

Joshua T Schiffer (JT)

Department of Medicine, University of Washington, Seattle, Washington, United States of America.
Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Clinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.

Corey Casper (C)

Department of Medicine, University of Washington, Seattle, Washington, United States of America.
Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Infectious Disease Research Institute, Seattle, Washington, United States of America.

Daniel Coombs (D)

Institute of Applied Mathematics, University of British Columbia, Vancouver, British Columbia, Canada.
Department of Mathematics, University of British Columbia, Vancouver, British Columbia, Canada.

Soren Gantt (S)

Département de Microbiologie, Infectiologie et Immunologie, Université de Montréal, Montréal, Québec, Canada.

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