A Reductionist Approach Using Primary and Metastatic Cell-Derived Extracellular Vesicles Reveals Hub Proteins Associated with Oral Cancer Prognosis.

extracellular vesicles integrative analysis lymph node metastasis mass spectrometry mouth neoplasms multi-omics oral squamous cell carcinoma prognosis proteomics

Journal

Molecular & cellular proteomics : MCP
ISSN: 1535-9484
Titre abrégé: Mol Cell Proteomics
Pays: United States
ID NLM: 101125647

Informations de publication

Date de publication:
2021
Historique:
received: 11 02 2021
revised: 28 05 2021
accepted: 20 06 2021
pubmed: 30 6 2021
medline: 25 3 2022
entrez: 29 6 2021
Statut: ppublish

Résumé

Oral squamous cell carcinoma (OSCC) has high mortality rates that are largely associated with lymph node metastasis. However, the molecular mechanisms that drive OSCC metastasis are unknown. Extracellular vesicles (EVs) are membrane-bound particles that play a role in intercellular communication and impact cancer development and progression. Thus, profiling EVs would be of great significance to decipher their role in OSCC metastasis. For that purpose, we used a reductionist approach to map the proteomic, miRNA, metabolomic, and lipidomic profiles of EVs derived from human primary tumor (SCC-9) cells and matched lymph node metastatic (LN1) cells. Distinct omics profiles were associated with the metastatic phenotype, including 670 proteins, 217 miRNAs, 26 metabolites, and 63 lipids differentially abundant between LN1 cell- and SCC-9 cell-derived EVs. A multi-omics integration identified 11 'hub proteins' significantly decreased at the metastatic site compared with primary tumor-derived EVs. We confirmed the validity of these findings with analysis of data from multiple public databases and found that low abundance of seven 'hub proteins' in EVs from metastatic lymph nodes (ALDH7A1, CAD, CANT1, GOT1, MTHFD1, PYGB, and SARS) is correlated with reduced survival and tumor aggressiveness in patients with cancer. In summary, this multi-omics approach identified proteins transported by EVs that are associated with metastasis and which may potentially serve as prognostic markers in OSCC.

Identifiants

pubmed: 34186243
pii: S1535-9476(21)00090-6
doi: 10.1016/j.mcpro.2021.100118
pmc: PMC8350068
pii:
doi:

Substances chimiques

MicroRNAs 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

100118

Informations de copyright

Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Conflict of interest The authors declare no competing interests.

Auteurs

Ariane Fidelis Busso-Lopes (AF)

Laboratório Nacional de Biociências - LNBio, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil.

Carolina Moretto Carnielli (CM)

Laboratório Nacional de Biociências - LNBio, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil.

Flavia Vischi Winck (FV)

Laboratório de Biologia de Sistemas Regulatórios, Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, SP, Brazil.

Fábio Malta de Sá Patroni (FMS)

Laboratório Nacional de Biociências - LNBio, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil.

Ana Karina Oliveira (AK)

Laboratório Nacional de Biociências - LNBio, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil.

Daniela Campos Granato (DC)

Laboratório Nacional de Biociências - LNBio, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil.

Rute Alves Pereira E Costa (RAP)

Laboratório Nacional de Biociências - LNBio, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil.

Romênia Ramos Domingues (RR)

Laboratório Nacional de Biociências - LNBio, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil.

Bianca Alves Pauletti (BA)

Laboratório Nacional de Biociências - LNBio, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil.

Diego Mauricio Riaño-Pachón (DM)

Laboratório de Biologia de Sistemas Regulatórios, Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, SP, Brazil.

Juliana Aricetti (J)

Laboratório Nacional de Biorrenováveis - LNBR, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil.

Camila Caldana (C)

Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg, Potsdam-Golm, Germany.

Edgard Graner (E)

Departamento de Diagnóstico Oral, Faculdade de Odontologia de Piracicaba, Universidade Estadual de Campinas, Piracicaba, SP, Brazil.

Ricardo Della Coletta (RD)

Departamento de Diagnóstico Oral, Faculdade de Odontologia de Piracicaba, Universidade Estadual de Campinas, Piracicaba, SP, Brazil.

Kelly Dryden (K)

Molecular Electron Microscopy Core, University of Virginia, Charlottesville, Virginia, USA.

Jay William Fox (JW)

Department of Microbiology, Immunology and Cancer Biology, University of Virginia, Charlottesville, Virginia, USA.

Adriana Franco Paes Leme (AF)

Laboratório Nacional de Biociências - LNBio, Centro Nacional de Pesquisa em Energia e Materiais - CNPEM, Campinas, SP, Brazil. Electronic address: adriana.paesleme@lnbio.cnpem.br.

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Classifications MeSH