A reference-based multi-lattice indexing method integrating prior information correction and iterative refinement in protein crystallography.
MCDPS
data reduction
indexing algorithm
multi-crystal data processing suite
multi-crystal diffraction
protein crystallography
Journal
Acta crystallographica. Section A, Foundations and advances
ISSN: 2053-2733
Titre abrégé: Acta Crystallogr A Found Adv
Pays: United States
ID NLM: 101620182
Informations de publication
Date de publication:
01 Jul 2021
01 Jul 2021
Historique:
received:
20
01
2021
accepted:
01
04
2021
entrez:
1
7
2021
pubmed:
2
7
2021
medline:
15
12
2021
Statut:
ppublish
Résumé
A new multi-lattice indexing method based on the principle of whole-pattern matching given cell dimensions and space-group symmetry is presented for macromolecular crystallography. The proposed method, termed the multi-crystal data processing suite (MCDPS), features a local correction for prior information accompanied by iterative refinement of experimental parameters, both of which are numerically and experimentally demonstrated to be critical for accurately identifying multiple crystal lattices. Further analysis of data reduction and structure determination with conventional single-crystal programs reveals that the processed multi-lattice data sets are comparable in quality to typical single-crystal ones in terms of crystallographic metrics. Importantly, it is confirmed that careful exclusion of overlapping reflections prior to scaling is necessary to guarantee an accurate data reduction result. The potential for multi-lattice indexing in solving the general macroscopic twinning problem is also explored.
Identifiants
pubmed: 34196290
pii: S2053273321003521
doi: 10.1107/S2053273321003521
doi:
Substances chimiques
Macromolecular Substances
0
Proteins
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
277-288Subventions
Organisme : National Basic Research Program of China
ID : 2017YFA0504900
Organisme : Beijing Municipal Science & Technology Commission
ID : Z191100007219007
Organisme : Strategic Priority Research Program of CAS
ID : XDB37040302
Organisme : CAS Emergency Research Project on African Swine Fever
ID : KJZD-SW-L06-01