Molecular Taxonomy and Diversification of Atlantic Skates (Chondrichthyes, Rajiformes): Adding More Pieces to the Puzzle of Their Evolutionary History.
Atlantic Ocean
COI
DNA barcoding
NADH2
phylogenetic inference
skates
Journal
Life (Basel, Switzerland)
ISSN: 2075-1729
Titre abrégé: Life (Basel)
Pays: Switzerland
ID NLM: 101580444
Informations de publication
Date de publication:
22 Jun 2021
22 Jun 2021
Historique:
received:
24
05
2021
revised:
19
06
2021
accepted:
20
06
2021
entrez:
2
7
2021
pubmed:
3
7
2021
medline:
3
7
2021
Statut:
epublish
Résumé
Conservation and long-term management plans of marine species need to be based upon the universally recognized key-feature of species identity. This important assignment is particularly challenging in skates (Rajiformes) in which the phenotypic similarity between some taxa and the individual variability in others, hampers accurate species identification. Here, 432 individual skate samples collected from four major ocean areas of the Atlantic were barcoded and taxonomically analysed. A BOLD project ELASMO ATL was implemented with the aim of establishing a new fully available and well curated barcode library containing both biological and molecular information. The evolutionary histories of the 38 skate taxa were estimated with two concatenated mitochondrial markers (COI and NADH2) through Maximum Likelihood and Bayesian inference. New evolutionary lineages within the genus
Identifiants
pubmed: 34206388
pii: life11070596
doi: 10.3390/life11070596
pmc: PMC8303890
pii:
doi:
Types de publication
Journal Article
Langues
eng
Références
Science. 2014 May 30;344(6187):1246752
pubmed: 24876501
PeerJ. 2018 Sep 18;6:e5560
pubmed: 30245927
Syst Biol. 2012 May;61(3):539-42
pubmed: 22357727
Mol Biol Evol. 2017 Mar 1;34(3):772-773
pubmed: 28013191
Mol Biol Evol. 2018 Jun 1;35(6):1547-1549
pubmed: 29722887
Mol Ecol. 2012 Apr;21(8):1864-77
pubmed: 21883587
Trends Ecol Evol. 2007 Mar;22(3):148-55
pubmed: 17129636
PLoS One. 2012;7(4):e35858
pubmed: 22558244
Mitochondrial DNA. 2011 Oct;22 Suppl 1:106-22
pubmed: 21980986
Genes (Basel). 2021 Feb 24;12(3):
pubmed: 33668210
Proc Biol Sci. 2003 Aug 7;270 Suppl 1:S96-9
pubmed: 12952648
Mol Phylogenet Evol. 2003 Jan;26(1):1-7
pubmed: 12470932
Mol Ecol Resour. 2012 Nov;12(6):1012-20
pubmed: 22958713
PLoS One. 2011;6(12):e28655
pubmed: 22174860
J Evol Biol. 2005 Mar;18(2):436-46
pubmed: 15715849
Sci Adv. 2019 Nov 27;5(11):eaay9969
pubmed: 31807711
J Hered. 2017 Jun 1;108(4):431-437
pubmed: 28379490
PLoS One. 2017 Jan 20;12(1):e0170244
pubmed: 28107413
Proc Biol Sci. 2010 May 22;277(1687):1497-503
pubmed: 20106849
BMC Bioinformatics. 2014 Aug 30;15:294
pubmed: 25176556
Bioinformatics. 2014 May 1;30(9):1312-3
pubmed: 24451623
Genome. 2016 Nov;59(11):959-967
pubmed: 27653340
Nat Ecol Evol. 2018 Feb;2(2):288-298
pubmed: 29348644
Zootaxa. 2019 May 01;4590(5):zootaxa.4590.5.1
pubmed: 31716072
Mol Biol Evol. 1987 Jul;4(4):406-25
pubmed: 3447015
PeerJ. 2013 Aug 13;1:e129
pubmed: 24024082
Mitochondrial DNA A DNA Mapp Seq Anal. 2018 Aug;29(6):867-878
pubmed: 28927318
Mol Phylogenet Evol. 2014 Jun;75:245-51
pubmed: 24486989
Mitochondrial DNA B Resour. 2021 Mar 15;6(3):848-850
pubmed: 33796653
Sci Rep. 2019 Nov 5;9(1):15792
pubmed: 31690834
Mol Ecol. 2006 Jul;15(8):2239-51
pubmed: 16780437
Elife. 2014;3:e00590
pubmed: 24448405
Science. 2006 Nov 3;314(5800):787-90
pubmed: 17082450
Front Zool. 2007 Mar 07;4:8
pubmed: 17343734
Genes (Basel). 2019 Apr 18;10(4):
pubmed: 31003471
Mol Biol Evol. 1999 Jul;16(7):996-1002
pubmed: 10406116
Trends Ecol Evol. 1994 Oct;9(10):373-5
pubmed: 21236896
Bioinformatics. 2013 Nov 15;29(22):2869-76
pubmed: 23990417
J Fish Biol. 2012 Apr;80(5):1789-843
pubmed: 22497408
J Fish Biol. 2012 Apr;80(5):901-17
pubmed: 22497367
Mol Ecol Resour. 2010 Jul;10(4):615-27
pubmed: 21565066
Zootaxa. 2021 Mar 17;4947(1):zootaxa.4947.1.1
pubmed: 33757045
Heredity (Edinb). 2015 Mar;114(3):333-43
pubmed: 25469687
Mol Phylogenet Evol. 2012 Apr;63(1):28-42
pubmed: 22209858
Nature. 1992 May 14;357(6374):153-5
pubmed: 1579163
Mol Ecol Notes. 2007 May 1;7(3):355-364
pubmed: 18784790
Mol Ecol Resour. 2011 Nov;11(6):968-78
pubmed: 21658180
Evolution. 1985 Jul;39(4):783-791
pubmed: 28561359
J Fish Biol. 2016 Mar;88(3):837-1037
pubmed: 26860638
Nucleic Acids Res. 2016 Jan 4;44(D1):D67-72
pubmed: 26590407
Mol Ecol Resour. 2013 Nov;13(6):969-75
pubmed: 23280099
Proc Natl Acad Sci U S A. 1993 May 1;90(9):4087-91
pubmed: 8483925
Syst Biol. 2012 Oct;61(5):851-69
pubmed: 22398121
Sci Rep. 2018 Apr 27;8(1):6693
pubmed: 29703988
Nucleic Acids Res. 1994 Nov 11;22(22):4673-80
pubmed: 7984417
C R Biol. 2018 Nov - Dec;341(9-10):454-470
pubmed: 30425020
PLoS One. 2014 Feb 20;9(2):e87907
pubmed: 24586296
Zootaxa. 2016 Aug 05;4147(4):477-89
pubmed: 27515630
Syst Biol. 2008 Oct;57(5):809-13
pubmed: 18853366
J Fish Biol. 2009 Feb;74(2):329-56
pubmed: 20735564