A Comparative Study of Automatic Localization Algorithms for Spherical Markers within 3D MRI Data.

MRI marker automatic localization bone anchor fiducial magnetic resonance imaging (MRI) neurosurgery segmentation sphere detection stereotaxy

Journal

Brain sciences
ISSN: 2076-3425
Titre abrégé: Brain Sci
Pays: Switzerland
ID NLM: 101598646

Informations de publication

Date de publication:
30 Jun 2021
Historique:
received: 31 05 2021
revised: 23 06 2021
accepted: 28 06 2021
entrez: 2 7 2021
pubmed: 3 7 2021
medline: 3 7 2021
Statut: epublish

Résumé

Localization of features and structures in images is an important task in medical image-processing. Characteristic structures and features are used in diagnostics and surgery planning for spatial adjustments of the volumetric data, including image registration or localization of bone-anchors and fiducials. Since this task is highly recurrent, a fast, reliable and automated approach without human interaction and parameter adjustment is of high interest. In this paper we propose and compare four image processing pipelines, including algorithms for automatic detection and localization of spherical features within 3D MRI data. We developed a convolution based method as well as algorithms based on connected-components labeling and analysis and the circular Hough-transform. A blob detection related approach, analyzing the Hessian determinant, was examined. Furthermore, we introduce a novel spherical MRI-marker design. In combination with the proposed algorithms and pipelines, this allows the detection and spatial localization, including the direction, of fiducials and bone-anchors.

Identifiants

pubmed: 34208999
pii: brainsci11070876
doi: 10.3390/brainsci11070876
pmc: PMC8301951
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : European Regional Development Fund
ID : 100295891

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Auteurs

Christian Fiedler (C)

Department of Neurosurgery, University of Leipzig, 04103 Leipzig, SN, Germany.
Department of Physical Engineering/Computer Sciences, University of Applied Sciences, 08056 Zwickau, SN, Germany.

Paul-Philipp Jacobs (PP)

Department of Neurosurgery, University of Leipzig, 04103 Leipzig, SN, Germany.

Marcel Müller (M)

Fraunhofer Institute for Machine Tools and Forming Technology, 01187 Dresden, SN, Germany.

Silke Kolbig (S)

Department of Physical Engineering/Computer Sciences, University of Applied Sciences, 08056 Zwickau, SN, Germany.

Ronny Grunert (R)

Department of Neurosurgery, University of Leipzig, 04103 Leipzig, SN, Germany.
Fraunhofer Institute for Machine Tools and Forming Technology, 01187 Dresden, SN, Germany.

Jürgen Meixensberger (J)

Department of Neurosurgery, University of Leipzig, 04103 Leipzig, SN, Germany.

Dirk Winkler (D)

Department of Neurosurgery, University of Leipzig, 04103 Leipzig, SN, Germany.

Classifications MeSH