Spatial variability of prokaryotic and viral abundances in the Kermadec and Atacama Trench regions.


Journal

Limnology and oceanography
ISSN: 0024-3590
Titre abrégé: Limnol Oceanogr
Pays: United States
ID NLM: 9882871

Informations de publication

Date de publication:
Jun 2021
Historique:
received: 09 07 2020
revised: 01 12 2020
accepted: 04 01 2021
entrez: 9 7 2021
pubmed: 10 7 2021
medline: 10 7 2021
Statut: ppublish

Résumé

Hadal trenches represent the deepest part of the ocean and are dynamic depocenters with intensified prokaryotic activity. Here, we explored the distribution and drivers of prokaryotic and viral abundance from the ocean surface and 40 cm into sediments in two hadal trench regions with contrasting surface productivity. In the water column, prokaryotic and viral abundance decreased with water depth before reaching a rather stable level at ~ 4000 m depth at both trench systems, while virus to prokaryote ratios were increasing with depth, presumably reflecting the declining availability of organic material. Prokaryotic and viral abundances in sediments were lower at the adjacent abyssal sites than at the hadal sites and declined exponentially with sediment depth, closely tracking the attenuation of total organic carbon (TOC) content. In contrast, hadal sediment exhibited erratic depth profiles of prokaryotes and viruses with many subsurface peaks. The prokaryotic abundance correlated well to extensive fluctuations in TOC content at centimeter scale, which were likely caused by recurring mass wasting events. Yet while prokaryotic and viral abundances cross correlated well in the abyssal sediments, there was no clear correlation in the hadal sites. The results suggested that dynamic depositional conditions and higher substrate availability result in a high spatial heterogeneity in viral and prokaryotic abundances in hadal sediments in comparison to more stable abyssal settings. We argue that these conditions enhance the relatively importance of viruses for prokaryotic mortality and carbon recycling in hadal settings.

Identifiants

pubmed: 34239169
doi: 10.1002/lno.11711
pii: LNO11711
pmc: PMC8248377
doi:

Types de publication

Journal Article

Langues

eng

Pagination

2095-2109

Informations de copyright

© 2021 The Authors. Limnology and Oceanography published by Wiley Periodicals LLC on behalf of Association for the Sciences of Limnology and Oceanography.

Déclaration de conflit d'intérêts

None declared.

Références

Appl Environ Microbiol. 1991 May;57(5):1489-97
pubmed: 16348489
Proc Natl Acad Sci U S A. 2012 Oct 2;109(40):16213-6
pubmed: 22927371
Environ Microbiol. 2013 May;15(5):1262-74
pubmed: 23419081
Sci Rep. 2013;3:1915
pubmed: 23715086
PLoS One. 2015 Apr 20;10(4):e0124505
pubmed: 25894547
Nat Microbiol. 2016 Jan 25;1:15024
pubmed: 27572161
Sci Rep. 2017 Aug 21;7(1):8355
pubmed: 28827715
PLoS One. 2018 Apr 5;13(4):e0195102
pubmed: 29621268
ISME J. 2020 Mar;14(3):740-756
pubmed: 31827245
Ann Rev Mar Sci. 2014;6:393-414
pubmed: 23987913
Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):E1230-6
pubmed: 25713387
Nat Rev Microbiol. 2007 Oct;5(10):801-12
pubmed: 17853907
Microb Ecol. 2001 Oct;42(3):395-406
pubmed: 12024264
Front Microbiol. 2019 Aug 23;10:1952
pubmed: 31507564
Front Microbiol. 2019 Nov 14;10:2609
pubmed: 31798555
Appl Environ Microbiol. 2007 Jul;73(14):4429-38
pubmed: 17496133
Appl Environ Microbiol. 2004 Mar;70(3):1506-13
pubmed: 15006772
Front Microbiol. 2016 Aug 10;7:1261
pubmed: 27559333
Sci Adv. 2016 Oct 12;2(10):e1600492
pubmed: 27757416
Curr Issues Mol Biol. 2011;13(2):51-76
pubmed: 21502666
PLoS One. 2013;8(2):e57271
pubmed: 23468952
Nature. 2008 Aug 28;454(7208):1084-7
pubmed: 18756250
Front Microbiol. 2019 Mar 15;10:347
pubmed: 30930856

Auteurs

Clemens Schauberger (C)

Department of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.

Mathias Middelboe (M)

Department of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.
Marine Biological Section, Department of Biology University of Copenhagen Helsingør Denmark.

Morten Larsen (M)

Department of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.

Logan M Peoples (LM)

Marine Biology Research Division, Scripps Institution of Oceanography University of California San Diego La Jolla California USA.

Douglas H Bartlett (DH)

Marine Biology Research Division, Scripps Institution of Oceanography University of California San Diego La Jolla California USA.

Finn Kirpekar (F)

Department of Biochemistry and Molecular Biology University of Southern Denmark Odense M Denmark.

Ashley A Rowden (AA)

National Institute of Water and Atmospheric Research Wellington New Zealand.
School of Biological Sciences, Victoria University of Wellington Wellington New Zealand.

Frank Wenzhöfer (F)

Alfred Wegener Institute, Helmholtz Center for Polar and Marine Research Bremerhaven Germany.
Max Planck Institute for Marine Microbiology and Ecology Bremen Germany.

Bo Thamdrup (B)

Department of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.

Ronnie N Glud (RN)

Department of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.
Department of Ocean and Environmental Sciences Tokyo University of Marine Science and Technology Tokyo Japan.
Danish Institute for Advanced Study - DIAS, University of Southern Denmark Odense Denmark.

Classifications MeSH