Nudged Elastic Band Method for Molecular Reactions Using Energy-Weighted Springs Combined with Eigenvector Following.


Journal

Journal of chemical theory and computation
ISSN: 1549-9626
Titre abrégé: J Chem Theory Comput
Pays: United States
ID NLM: 101232704

Informations de publication

Date de publication:
10 Aug 2021
Historique:
pubmed: 20 7 2021
medline: 20 7 2021
entrez: 19 7 2021
Statut: ppublish

Résumé

The climbing image nudged elastic band method (CI-NEB) is used to identify reaction coordinates and to find saddle points representing transition states of reactions. It can make efficient use of parallel computing as the calculations of the discretization points, the so-called images, can be carried out simultaneously. In typical implementations, the images are distributed evenly along the path by connecting adjacent images with equally stiff springs. However, for systems with a high degree of flexibility, this can lead to poor resolution near the saddle point. By making the spring constants increase with energy, the resolution near the saddle point is improved. To assess the performance of this energy-weighted CI-NEB method, calculations are carried out for a benchmark set of 121 molecular reactions. The performance of the method is analyzed with respect to the input parameters. Energy-weighted springs are found to greatly improve performance and result in successful location of the saddle points in less than a thousand energy and force evaluations on average (about a hundred per image) using the same set of parameter values for all of the reactions. Even better performance is obtained by stopping the calculation before full convergence and complete the saddle point search using an eigenvector following method starting from the location of the climbing image. This combination of methods, referred to as NEB-TS, turns out to be robust and highly efficient as it reduces the average number of energy and force evaluations down to a third, to 305. An efficient and flexible implementation of these methods has been made available in the ORCA software.

Identifiants

pubmed: 34275279
doi: 10.1021/acs.jctc.1c00462
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

4929-4945

Auteurs

Vilhjálmur Ásgeirsson (V)

Science Institute and Faculty of Physical Sciences, University of Iceland, VR-III, 107 Reykjavík, Iceland.

Benedikt Orri Birgisson (BO)

Science Institute and Faculty of Physical Sciences, University of Iceland, VR-III, 107 Reykjavík, Iceland.

Ragnar Bjornsson (R)

Max-Planck-Institute for Chemical Energy Conversion, Mülheim an der Ruhr 45470, Germany.

Ute Becker (U)

Max-Planck-Institute for Kohlenforschung, Mülheim an der Ruhr 45470, Germany.

Frank Neese (F)

Max-Planck-Institute for Kohlenforschung, Mülheim an der Ruhr 45470, Germany.

Christoph Riplinger (C)

FaccTs GmbH, Rolandstrasse 67, 50677 Cologne, Germany.

Hannes Jónsson (H)

Science Institute and Faculty of Physical Sciences, University of Iceland, VR-III, 107 Reykjavík, Iceland.

Classifications MeSH