A deep learning algorithm for sleep stage scoring in mice based on a multimodal network with fine-tuning technique.

Algorithm Deep learning NREM sleep REM sleep Sleep stage scoring

Journal

Neuroscience research
ISSN: 1872-8111
Titre abrégé: Neurosci Res
Pays: Ireland
ID NLM: 8500749

Informations de publication

Date de publication:
Dec 2021
Historique:
received: 05 04 2021
revised: 29 06 2021
accepted: 16 07 2021
pubmed: 20 7 2021
medline: 15 12 2021
entrez: 19 7 2021
Statut: ppublish

Résumé

Sleep stage scoring is important to determine sleep structure in preclinical and clinical research. The aim of this study was to develop an automatic sleep stage classification system for mice with a new deep neural network algorithm. For the purpose of base feature extraction, wake-sleep and rapid eye movement (REM) and non- rapid eye movement (NREM) models were developed by extracting defining features from mouse-derived electromyogram (EMG) and electroencephalogram (EEG) signals, respectively. The wake-sleep model and REM-NREM sleep model were integrated into three different algorithms including a rule-based integration approach, an ensemble stacking approach, and a multimodal with fine-tuning approach. The deep learning algorithm assessing sleep stages in animal experiments by the multimodal with fine-tuning approach showed high potential for increasing accuracy in sleep stage scoring in mice and promoting sleep research.

Identifiants

pubmed: 34280429
pii: S0168-0102(21)00173-5
doi: 10.1016/j.neures.2021.07.003
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

99-105

Informations de copyright

Copyright © 2021 Elsevier B.V. and Japan Neuroscience Society. All rights reserved.

Auteurs

Keishi Akada (K)

hhc Data Creation Center, Eisai Co., Ltd., Koishikawa 4-6-10, Bunkyo-ku, Tokyo 112-8088, Japan.

Takuya Yagi (T)

Neurology Business Group, Eisai Inc., 100 Tice Blvd, Woodcliff Lake, NJ 07677, USA. Electronic address: Takuya_Yagi@eisai.com.

Yuji Miura (Y)

hhc Data Creation Center, Eisai Co., Ltd., Koishikawa 4-6-10, Bunkyo-ku, Tokyo 112-8088, Japan.

Carsten T Beuckmann (CT)

Neurology Business Group, Eisai Co., Ltd., 5-1-3 Tokodai, Tsukuba, Ibaraki 300-2635, Japan.

Noriyuki Koyama (N)

Government Relations Strategy Department, Eisai Co. Ltd., 4-6-10 Koishikawa, Bunkyo-ku, Tokyo 112-8088, Japan.

Ken Aoshima (K)

hhc Data Creation Center, Eisai Co., Ltd., Koishikawa 4-6-10, Bunkyo-ku, Tokyo 112-8088, Japan. Electronic address: k3-aoshima@hhc.eisai.co.jp.

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Classifications MeSH